Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFY8
Confidence7.78%DateThu Jan 5 11:27:35 GMT 2012
Rank48Aligned Residues10
% Identity30%Templatec1icfB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (cathepsin l: light chain); PDBTitle: crystal structure of mhc class ii associated p41 ii fragment in2 complex with cathepsin l
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.
Predicted Secondary structure 




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Query Sequence  GTPYWVITNT
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Template Conservation 
  






Template Sequence  NNKYWLVKNS
Template Known Secondary structure 



S
Template Predicted Secondary structure 



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   179180........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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