Job Description P62066 Confidence 2.47% Date Thu Jan 5 12:07:28 GMT 2012 Rank 51 Aligned Residues 62 % Identity 27% Template c2c8iB_ PDB info PDB header:virus/receptor Chain: B: PDB Molecule:echovirus 11 coat protein vp2; PDBTitle: complex of echovirus type 12 with domains 1, 2, 3 and 4 of2 its receptor decay accelerating factor (cd55) by cryo3 electron microscopy at 16 a Resolution 14.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	V	A	R	F	S	C	G	K	T	A	Q	L	S	K	K	Q	T	G	Y	Y	S	P	E	I	F	P	S	T	G	K	D	C	N	P	Q	P	A	N	C	L	K	D	Q	Y	V	L	R	H	C	C	V	D	D	R	S	G	K	M	G	Y	S	V	K	F	L	V	L	T	R	M	D	T	E	T	A	S	L	F
Query Conservation
Alig confidence																								.	.																							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation																								.	.																							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		V	A	T	C	R	F	Y	T	L	E	S	V	T	W	E	K	D	S	P	G	W	W	.	.	W	K	F	P	D	A	L	K	D	M	G	L	F	G	Q	N	M	Y	Y	H	Y	L	.	.	.	.	.	.	.	.	.	.	.	G	R	A	G	Y	T	I	H	V	Q	C	.	.	.	.	.	.	.	N	A	S	K	F
Template Known Secondary structure		T	T	S	S	S											T	T						.	.			S	T	T	T	T	T	S	S	T	T	T	T					T				.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																								.	.																							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.												.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.
		81	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		118	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions