 |
| Job Description | P0A7M6 | | Confidence | 11.00% | Date | Thu Jan 5 11:05:56 GMT 2012 |
| Rank | 21 | Aligned Residues | 19 |
| % Identity | 26% | Template | c1envA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:hiv-1 envelope protein chimera consisting of a fragment of |
PDBTitle: atomic structure of the ectodomain from hiv-1 gp41
|
| Resolution | 2.60 Å |
|
|   |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
H | L | L | K | Q | V | R | R | D | V | A | R | V | K | T | L | L | N | E |
| Query Conservation |   |
  |   |
|
|   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
| Template Sequence |   |
S | K | I | Y | H | I | E | N | E | I | A | R | I | K | K | L | I | G | E |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|