Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7M6
Confidence11.00%DateThu Jan 5 11:05:56 GMT 2012
Rank21Aligned Residues19
% Identity26%Templatec1envA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:hiv-1 envelope protein chimera consisting of a fragment of PDBTitle: atomic structure of the ectodomain from hiv-1 gp41
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........
Predicted Secondary structure 
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Query Sequence  HLLKQVRRDVARVKTLLNE
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Template Conservation            

   
  
Template Sequence  SKIYHIENEIARIKKLIGE
Template Known Secondary structure 
Template Predicted Secondary structure 
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   11........20.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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