Return to main results Retrieve Phyre Job Id

Job DescriptionP06864
Confidence98.79%DateThu Jan 5 10:59:27 GMT 2012
Rank93Aligned Residues123
% Identity15%Templated2pb1a1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.... .....380.. .......390....... ..400.........410......
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Query Sequence  EKDLQLMKQHNINSVRT. . . . . . . . . . . . AHYPNDPR. . . . . FYELCDIYGLFVMAE. . . TDVESHGFANVGDISRITD.
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Template Sequence  EQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQ
Template Known Secondary structure  TT

GGGT


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TT

TT
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GGGSSTT


TT
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   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   417..420.........430......... 440.........450... ......460.........470.........480
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Query Sequence  DPQWEKVYVERIVRHIHAQKNHP. . . SIIIWSLGNESGYG. . . . . . . . CNIRAMYHAAKALDDTRLVHYEEDRDA
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Template Sequence  NGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQV
Template Known Secondary structure  STTSSGGGTTTS
S


GGGS
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   157..160.........170.........180.........190.........200.........210.........220.........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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