Job Description P06864 Confidence 97.80% Date Thu Jan 5 10:59:27 GMT 2012 Rank 118 Aligned Residues 220 % Identity 19% Template d2cyga1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.45

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		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	N	R	H	D	N	D	H	R	K	G	R	A	V	G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	A	H	Y	P	N	D	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D
Query Conservation
Alig confidence							.	.	.													.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.													.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	C	Y	G	.	.	.	M	L	G	N	N	L	P	P	P	S	E	V	.	.	.	V	S	L	Y	K	S	N	N	I	A	R	M	R	L	.	.	Y	D	P	N	Q	A	A	L	Q	A	L	R	N	S	N	I	Q	V	L	L	D	V	P	R	.	.	.	.	.	.	.	.	.	.	.	S	D	V	Q	S	L
Template Known Secondary structure							.	.	.				S	S								.	.	.							T	T							.	.	S	S										T	T	S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.													.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.												.	.	.	.	.	90
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.									.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470			.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.																		.	.
Query SS confidence																																						.	.	.	.	.	.	.	.																		.	.
Query Sequence		P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	.	.	.	.	.	.	.	.	C	N	I	R	A	M	Y	H	A	A	K	A	L	D	D	T	R	.	.	L	V	H	Y	E	E	D	R	D	A	E	V	V	D	I	I	S
Query Conservation																																						.	.	.	.	.	.	.	.																		.	.
Alig confidence																																						.	.	.	.	.	.	.	.																		.	.				.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		A	S	N	P	S	A	A	G	D	W	I	R	R	N	V	V	A	Y	W	P	S	V	S	F	R	Y	I	A	V	G	N	E	L	I	P	G	S	D	L	A	Q	Y	I	L	P	A	M	R	N	I	Y	N	A	L	S	S	A	G	L	Q	N	Q	I	K	V	S	.	.	.	.	.	T	A	V	D	T	G	V	L	G
Template Known Secondary structure					T	T										T	G	G	G	T	T	T	S										S		T	T	T	S	T	T	G	G	G															T	T		T	T	T	S				.	.	.	.	.					G	G	G	B	S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.
		488	.	490	.																																																																									.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	Y	P	P	S	A	G	A	F	S	S	A	A	Q	A	Y	L	S	P	I	V	Q	F	L	A	S	N	G	A	P	L	L	V	N	V	Y	P	Y	F	S	Y	T	G	N	P	G	Q	I	S	L	P	Y	A	L	F	T	A	S	G	V	V	V	Q	D	G	R	F	S	Y	Q	N	L	F	D	A	I	V	D	A
Template Known Secondary structure				S	S	G	G	G			B																			T																S	T	T	T	S							T				S		S				T	T					S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		496	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure									.	.																.
Query SS confidence									.	.																.
Query Sequence		M	N	E	F	G	E	Y	.	.	P	H	P	K	P	R	I	I	C	E	Y	A	H	A	M	.	G	N	G	P	G	G	L	T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y	P	N
Query Conservation									.	.																.
Alig confidence									.	.																.																		.	.	.	.	.	.	.																								.
Template Conservation																																												.	.	.	.	.	.	.																								.
Template Sequence		V	F	A	A	L	E	R	V	G	G	A	N	V	A	V	V	V	S	E	S	G	W	P	S	A	G	G	G	A	E	A	S	T	S	N	A	Q	T	Y	N	Q	N	.	.	.	.	.	.	.	L	I	R	H	V	G	G	G	T	P	R	R	P	G	K	E	I	E	A	Y	I	F	E	.	M	F	N	E	N	Q	K
Template Known Secondary structure								T	T	T		T	T												S	S	S	S	S	T	T	S	S											.	.	.	.	.	.	.					G	G	G			S	S	S		S	S							S		.	S	B			T	T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.																								.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.								.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.
		573	.	.	.		.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		N	Y	N	F	.	C	L	D	G	L	I	Y	S	D	Q	T	P	G
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		A	G	G	I	E	Q	N	F	G	L	F	Y	P	N	K	Q	P	V
Template Known Secondary structure			S	S	G	G	G				S	B		T	T	S		B	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions