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Job DescriptionP06864
Confidence100.00%DateThu Jan 5 10:59:27 GMT 2012
Rank15Aligned Residues281
% Identity43%Templated1yq2a5
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETD
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Template Sequence  VRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECD
Template Known Secondary structure 
TTTT





TTTTT


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   313......320.........330.........340.........350.........360.........370.........380.........390..
 
   400.........410.........420.........430.........440.........450.........460.........470.........
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Query Sequence  VESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRD
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Template Sequence  LETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTGSNLAAMAAWAHARDSSRPVHYEGDYT
Template Known Secondary structure 


GGGTTTTTTT
GGG
GGGTT
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TT
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   393......400.........410.........420.........430.........440.........450.........460.........470..
 
   480.........490.........500.... .....510.........520.........530.........540...
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Query Sequence  AEVVDIISTMYTRVPLMNEFGEYPH. . . . . . . . . . . . . . . . PKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVW
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Template Sequence  GAYTDVYSRMYSSIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGAMDQYEALVDKYPRLHGGFVW
Template Known Secondary structure 
SS
SSS


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   473......480.........490.........500.........510.........520.........530.........540.........550..
 
   544.....550.........560.........570.........580.........590.........600
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Query Sequence  EWCDHGIQAQDDHGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIA
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Template Sequence  EWRDHGIRTRTAEGMEFFAYGGDFGEVVHDSNFVMDGMVLSDSTPTPGLYEFKQIVS
Template Known Secondary structure 
SB



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TTTT

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GGGG


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   553......560.........570.........580.........590.........600.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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