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Job DescriptionP06864
Confidence98.81%DateThu Jan 5 10:59:27 GMT 2012
Rank92Aligned Residues199
% Identity20%Templated1w32a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYG. . . . . . .
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Template Sequence  DRLVSWAAQNGQTVHGHALVWHPSYQLPNWASD. . SNANFRQDFARHIDTVAAHFAGQ. . VKSWDVVNEALFDSADDPDG
Template Known Secondary structure  TT



GGG

TT
ST..T
TTTTTT..
S

B

GGG
TT
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   63......70.........80.........90..... ....100.........110........ .120.........130........
 
   454.....460.........470........ .480.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . CNIRAMYHAAKALDDTRLVHYEEDR. . . . . . . . . . . . . . . . . . . . DAEVVDIISTM. . . . .
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Template Sequence  RGSANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMN
Template Known Secondary structure 

TT

TST
TTSSSTTS
STT





S
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   490..... ....500.........510.........520... ......530... ...
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Query Sequence  . YTRVPL. . . . MNEFGEYPHPKPRIICEYAHAMGNGPGG. . . . . . . . . . . . . . . . . . . . . . . . . LTEYQNVFYK. . . HDC
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Template Sequence  DYPSIANIRQAMQKIVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEVVPPGR
Template Known Secondary structure  SSS
TT
SS
S

TTSS
SSS


SGGGGSS

S
TT
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   537..540.........550.........560.........570.........580.........590.........600
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Query Sequence  IQGHYVWEWCDHGIQAQDDHGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIA
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Template Sequence  RGGITVWGIADPDSWLYTHQNLPDWP. . . . . . . . . . . . . . . . . LLFNDNLQPKPAYQGVVEALS
Template Known Secondary structure  S
SBGGGSTTSTT


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TTS
B
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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