Job Description P06864 Confidence 97.10% Date Thu Jan 5 10:59:27 GMT 2012 Rank 128 Aligned Residues 111 % Identity 14% Template d1vema2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.										.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query Sequence		G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	.	.	.	.	.	A	H	Y	P	N	D	P	.	.	.	.	.	.	.	.	.	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D	P
Query Conservation																								.	.	.	.	.								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.								.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																																											.	.
Template Sequence		N	W	E	T	F	E	N	D	L	R	W	A	K	Q	N	G	F	Y	A	I	T	V	D	F	W	W	G	D	M	E	K	N	G	D	Q	Q	F	D	F	S	Y	A	Q	R	F	A	Q	S	V	K	N	A	G	M	K	M	I	.	.	P	I	I	S	T	H	Q	C	G	G	N	V	G	D	D	C	N	V	P	I	P
Template Known Secondary structure																T	T														T		S	S	T	T																	T	T					.	.						S		B	S	S	S	T	T					B
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		419	420	.																																								.	.	.	.	.	.	.	.	430	.	.	.																.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	Y	V	E	R	I	V	R	H	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	K	N	H	P	S	I	I	I	W
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	W	V	W	N	Q	K	S	D	D	S	L	Y	F	K	S	E	T	G	T	V	N	K	E	T	L	N	P	L	A	S	D	V	I	R	K	E	Y	G	E	L	Y	T	A	F	A	A	A	M	K	P	Y	K	D	V	I	A	K	I	Y	L	S	G	G	P	A	G	E	L	R	Y	P	S	Y	T	T	S	D	G	T
Template Known Secondary structure		G	G	G	G	G	G		S	S	S		S	S				T	T						S	S			T	T																				T	G	G	G	G	G	G	B								S	G	G	G	B	S	S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	N	E	S	G	Y	G	C	N	I	R	A	M	Y	H	A	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	P	S	R	G	K	F	Q	A	Y	T	E	F	A	K	S	K	F	R	L
Template Known Secondary structure			T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions