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Job DescriptionP06864
Confidence98.04%DateThu Jan 5 10:59:27 GMT 2012
Rank113Aligned Residues214
% Identity18%Templated1r85a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   381........390.........400. ........410.........420.........430.........440......
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Query Sequence  PRFYELCDIYGLFVMAETDVE. . . . . . . . . . . . . . SHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSL
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Template Sequence  DRIVKFAKANGMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKDD. . IKYWDV
Template Known Secondary structure  TT

S

STT

GGGGB
TTSSBGGG


TTT..

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   7980.........90.........100.........110.........120.........130.........140.........150 ......
 
   447..450.. .......460...... ...470.........480.. .......
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Query Sequence  GNESGY. . . . . . . . . . . . . . . GCNIRAMYHAAKAL. DDTRLVHYEEDRDAEV. . . . . . . . . . . . . . . . . . . VDIISTM. .
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Template Sequence  VNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSH
Template Known Secondary structure  S
B
TTSSB


TT
TTSS
TTSTTTT





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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   490.........500. ........510.........520... ......530.... .....540...
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Query Sequence  . . . . YTRVPLMNEFGE. . YPHPKPRIICEYAHAMGNGPGG. . . . . . . . . . . . . . . . . . . LTEYQNVFYKH. DCIQGHYVW
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Template Sequence  IQIGWPSEAEIEKTINMFAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFW
Template Known Secondary structure 
SSSS
TT

SS
SS



SSGGGS
TGGGS
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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   544.....550.........560.........570.........580 .........590......
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Query Sequence  EWCDHGIQAQDDHGNVWYKFGGDYGDYPNNYNFCLDG. . . . . . . LIYSDQTPGPGLKEYK
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Template Sequence  GIADNHTWLDSRADVYYDANGNVVVDPNAPYAKVEKGKGKDAPFVFGPDYKVKPAYWAII
Template Known Secondary structure  SSSTTS
GGGGG


TTS


TTS

STT
S



SSB
TTSBB
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   317..320.........330.........340.........350.........360.........370......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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