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Job DescriptionP06864
Confidence96.50%DateThu Jan 5 10:59:27 GMT 2012
Rank133Aligned Residues137
% Identity21%Templated1qw9a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.... .....380 .........390.........400....
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Query Sequence  EKDLQLMKQHNINSVRT. . . . . . . . . . . . . . . . . . . . . . . . . . . . AHYPND. . . . . PRFYELCDIYGLFVMAETDVESHG
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Template Sequence  QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTRG
Template Known Secondary structure  T

S
SGGGGG

GGGGSS
GGG


TTTT

SS
T


SS

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   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   405....410.........420.........430.........440 .........450. ....
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Query Sequence  FANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPS. . . . . . . . . . . . . . . . . IIIWSLGNESG. . . . . . . . . . . . YGCN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . IDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRI
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SSSTT

S




SS


STTSTT


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   134.....140.........150.........160.........170.........180.........190...
 
   456...460.........470.........480.. .......490.
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Query Sequence  IRAMYHAAKALDDTRLVHYEEDRDAEV. . . . . . . . . . . . . . . . . VDIISTMYT. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHTYDHVDYISLHQYYGNRDNDTANYLALSLEMDDFIRSVVA
Template Known Secondary structure 
TT



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TTSTTTTGGG
S

TT

TTT
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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   492.......500.........510....
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Query Sequence  RVPLMNEFGEYPHPKPRIICEYA
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Template Sequence  IADYVKAKKRSKKTIHLSFDEWN
Template Known Secondary structure  T
S


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   274.....280.........290......
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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