Job Description P06864 Confidence 97.59% Date Thu Jan 5 10:59:27 GMT 2012 Rank 122 Aligned Residues 226 % Identity 15% Template d1ghsa_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	N	R	H	D	N	D	H	R	K	G	R	A	V	G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	A	H	Y	P	N	D	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D
Query Conservation
Alig confidence							.	.	.													.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.													.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	C	Y	G	.	.	.	V	I	G	N	N	L	P	S	R	S	D	V	.	.	.	V	Q	L	Y	R	S	K	G	I	N	G	M	R	I	.	.	Y	F	A	D	G	Q	A	L	S	A	L	R	N	S	G	I	G	L	I	L	D	I	G	N	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	A	N	I
Template Known Secondary structure							.	.	.			S	S	S								.	.	.								T							.	.	S	S									T	T	T	S										G	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure							.	.	.													.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.				.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.	60	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.							.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470		.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																																						.	.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	.	.	.	.	.	.	C	N	I	R	A	M	Y	H	A	A	K	A	L	D	D	T	R	.	L	V	H	Y	E	E	D	R	D	A	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	S	T	S	N	A	A	S	W	V	Q	N	N	V	R	P	Y	Y	P	A	V	N	I	K	Y	I	A	A	G	N	E	V	Q	G	G	A	T	Q	S	I	L	P	A	M	R	N	L	N	A	A	L	S	A	A	G	L	G	A	I	K	V	S	T	S	I	R	F	D	E	V	A	N	S	F	P	P	S	A	G
Template Known Secondary structure																T	T	T	T	T	T	T	S										S			G	G	G	G	G	G																T		T	T	S								G	G	G					S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
																	481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	V	D	I	I	S	T	M	Y	T	R	V	P	L	M	N	E	F	G	E	Y	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	K	N	A	Y	M	T	D	V	A	R	L	L	A	S	T	G	A	P	L	L	A	N	V	Y	P	Y	F	A	Y	R	D	N	P	G	S	I	S	L	N	Y	A	T	F	Q	P	G	T	T	V	R	D	Q	N	N	G	L	T	Y	T	S	L	F	D	A	M	V	D	A	V	Y	A	A	L	E	K	A	G	A
Template Known Secondary structure				S	S	T													T																	T	T	T	S							T		T	T						T	T	T																							T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
			505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	K	P	R	I	I	C	E	Y	A	H	A	M	G	N	G	P	G	G	L	T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y	P	N	N	Y	N	F	C	L	D	G	L	I	Y
Query Conservation		.
Alig confidence		.																															.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		P	A	V	K	V	V	V	S	E	S	G	W	P	S	A	G	G	F	A	A	S	A	G	N	A	R	T	Y	N	Q	G	.	.	.	.	.	.	.	L	I	N	H	V	G	G	G	T	P	K	K	R	E	A	L	E	T	Y	I	F	A	M	F	N	E	N	Q	K	T	G	D	A	T	E	R	S	F	G	L	F	N
Template Known Secondary structure		T	T												S	S	S	S	T	T													.	.	.	.	.	.	.			T	T	G	G	G			S	S			S									S	B			T	T			S	S	G	G	G	G	G			S	B
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.								.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		584	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	Q	T	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	K	S	P	A
Template Known Secondary structure		T	T	S		B	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions