Job Description P06864 Confidence 25.39% Date Thu Jan 5 10:59:27 GMT 2012 Rank 276 Aligned Residues 102 % Identity 10% Template d1gcya2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.																	.	.	.	.	.	380	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	R	Y	V	M	L	H	G	V	N	R	H	D	N	D	H	R	K	G	R	A	V	G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	Y	P	N	D	P	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		G	G	D	E	I	I	L	Q	G	F	H	W	.	.	N	V	V	R	E	A	P	N	D	W	Y	N	I	L	R	Q	Q	A	A	T	I	A	A	D	G	F	S	A	I	W	M	P	V	P	W	R	D	F	S	S	W	S	K	S	G	G	G	E	G	Y	F	W	H	D	F	N	K	N	G	R	Y	G	S	D	A	Q
Template Known Secondary structure		G	G										T	.	.	T					S	T	T	T															T	T		S								S						B				B			S	S	T	T		S	S	S		S		S	S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
				382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.																																				.	.	.	.	420	.	.	.	.
Predicted Secondary structure		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	P	Q	W	E	K	V	Y
Query Conservation		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	Q	A	A	S	A	L	G	G	A	G	V	K	V	L	Y	D	V	V	P	N	H	M	N	R	G	Y	P	D	K	E	I	N	L	P	A	G	Q	G	F	W	R	N	D	C	A	D	P	G	N	Y	P	N	D	C	D	D	G	D	R	F	I	G	G	D	A	D	L	N	T	G	H	P	Q	V	Y	G	M	F
Template Known Secondary structure												T	T										S	B			T	T		S	S		S					S	S	S	S		B	G	G	G	S				S	S	S		B	T	T	B	S	S			S	T	T	S	T	T	B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		425	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	I	V	R	H	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	E	F	T	N	L	R	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions