Return to main results Retrieve Phyre Job Id

Job DescriptionP06864
Confidence37.34%DateThu Jan 5 10:59:27 GMT 2012
Rank229Aligned Residues126
% Identity16%Templated1bxca_
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   339340.........350.........360.........370.... .....380 .........390.........400.....
Predicted Secondary structure 
















...





..........










Query SS confidence 



































. . .





. . . . . . . . . .
























Query Sequence  VNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRT. . . AHYPND. . . . . . . . . . PRFYELCDIYGLFVMAETDVESHGF
Query Conservation 

 
   
  
     
    

 


  
 
 

 ...



  ..........  






 

 
 


  
 

 
Alig confidence 



































...





..........



















.



Template Conservation 
   
 
 

          
      


 





  
  
      
    
  

  
   

 
  
   .

  
Template Sequence  VGNVGRDPFGDAVRERLDPVYVGHKLAELGVHGVNLHDEDLIPRGTPPQERDQIVRRFKRALDETGLKVPMVTGN. LFSD
Template Known Secondary structure  T



BTTB


S



T
SS
SS

T
B



.
SSS
Template Predicted Secondary structure 





































.



Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80.........90. ....
 
   406...410.........420.........430... ......440...... ...450.........460.....
Predicted Secondary structure 











..




..






Query SS confidence 



























. .












. .


















Query Sequence  ANVGDISRITDDPQWEKVYVERIVRHIH. . AQKNHPSIIIWSL. . GNESGYGCNIRAMYHAAKA
Query Conservation              
            

 ..








 


..




 
          
 
Alig confidence 



























..












..


















Template Conservation       
 

 

   
  

   
  



  


  
 

 
  
       
         
Template Sequence  PGFKDGGFTSRDPWVRAYAFRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVRE
Template Known Secondary structure  GGGTT
STT
SSTT



TT
S
GGG
GGGT
Template Predicted Secondary structure 



























Template SS confidence 































































   96...100.........110.........120.........130.........140.........150.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions