 |
Job Description | P06864 | Confidence | 94.82% | Date | Thu Jan 5 10:59:27 GMT 2012 |
Rank | 157 | Aligned Residues | 73 |
% Identity | 19% | Template | c3pg8B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; |
PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima
|
Resolution | 2.00 Å |
|
 |
  |   |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | |
|
|
|
. | . | . | . | . | . | . | 390 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | V | R | D | G | L | F | W | I | N | N | R | Y | V | M | L | H | G | V | N | R | H | D | N | D | H | R | K | G | R | A | V | G | M | D | R | V | E | K | D | L | Q | L | M | K | Q | H | N | I | N | S | V | R | T | A | H | Y | P | N | D | P | R | . |
. |
. |
. |
F | Y | E | L | C | D | I | Y | G | L | F | V | M |
Query Conservation |   |
|
|   |   |   |   |   |
|   |
|
|
|
|   |
|   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|   |
|
|
|
|   |   |   |   | . | . | . | . |
|
|
|
|
|
|
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|
| . |   |   |   |
|   |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
I | D | L | G | D | V | K | I | G | . |
N | G | Y | F | T | I | I | A | G | P | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | G | R | E | M | L | M | E | T | A | H | F | L | S | E | L | G | V | K | V | L | R | G | G | A | Y | K | L | G | E | K | G | L | E | Y | L | R | E | A | A | D | K | Y | G | M | Y | V | V |
Template Known Secondary structure |   |
 |  |
| S | S |
|  |  | S | . | T | T |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
396 | . | . | . | 400 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | T | D | V | E | S | H |
Query Conservation |   |
|
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |
Template Sequence |   |
T | E | A | L | G | E | D | D |
Template Known Secondary structure |   |
 |  |  |
| S | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|