Job Description P06864 Confidence 98.94% Date Thu Jan 5 10:59:27 GMT 2012 Rank 82 Aligned Residues 183 % Identity 13% Template c3ndyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase d; PDBTitle: the structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans Resolution 2.10 Å

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.														380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	.	.	.	.	.	A	H	Y	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q
Query Conservation																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		H	A	M	I	N	K	I	K	E	A	G	F	N	T	L	R	L	P	V	T	W	D	G	H	M	G	A	A	P	E	Y	T	I	D	Q	T	W	M	K	R	V	E	E	I	A	N	Y	A	F	D	N	D	M	Y	V	I	I	N	L	H	.	.	.	.	.	H	E	N	E	W	L	K	P	F	Y	A	N	E	A	Q
Template Known Secondary structure												T											T	T	S	B			T	T	T			B																	T	T	T									.	.	.	.	.	S		T	T	T				S	T	T	T
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.																			.	.	.	.	.	460	.	.	.	.	.	.	.				.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	R	A	M	Y	H	A	A	K	A	L	D	.	.	.	D	T	R	L	V	H	Y	E	E	D	R
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		V	K	A	Q	L	T	K	V	W	T	Q	I	A	N	N	F	K	K	Y	G	D	H	L	I	F	E	T	M	N	E	P	R	P	V	G	A	S	L	Q	W	T	G	G	S	Y	E	N	R	E	V	V	N	R	Y	N	L	T	A	V	N	A	I	R	A	T	G	G	N	N	A	T	R	Y	I	M	V	P	T	L	A
Template Known Secondary structure																	T	T	T			T	T					S		S						S	G	G	G	T	T	S																								T		G	G	G	G	T	S							G	G
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
																479	480	.	.	.	.	.	.	.	.	.	490	.	.																				.	.	.	.	.	.	.	500	.							.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	V	V	D	I	I	S	T	M	Y	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	L	M	N	E	F	G	E	.	.	.	.	.	.	Y	P	H	P	K	P	R	I	I	C	E	Y	A	H	A	M	G	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	A	M	S	T	T	I	N	D	L	V	I	P	N	N	D	S	K	V	I	V	S	L	H	M	Y	S	P	Y	F	F	A	M	D	I	N	G	T	S	S	W	G	S	D	Y	D	K	S	S	L	D	S	E	F	D	A	V	Y	N	K	F	V	K	N	G	R	A	V	V	I	G	E	M	G	S	I	N	K	N
Template Known Secondary structure		G			S						T				G	G	G		T	T										S					T		T	T	S		S																						T	G	G	G	T													S	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.			.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		G	P	G	G	L	T	E	Y	Q	N	V	F	Y	K	H	.	.	D	C	I	Q	G	H	Y	V	W	E	W
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		N	T	A	A	R	V	T	H	A	E	Y	Y	A	K	S	A	K	A	R	G	L	T	P	I	W	W	D	N
Template Known Secondary structure																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions