Job Description P06864 Confidence 98.88% Date Thu Jan 5 10:59:27 GMT 2012 Rank 86 Aligned Residues 184 % Identity 17% Template c3kzsD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:glycosyl hydrolase family 5; PDBTitle: crystal structure of glycosyl hydrolase family 5 (np_809925.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution Resolution 2.10 Å

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		316	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	R	D	I	K	V	R	D	G	L	F	W	I	.	N	N	R	Y	V	M	L	H	G	V	N	R	H	D	N	D	H	R	K	G	R	A	V	G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	A	H	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.												.	.	.								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.								.
Template Sequence		G	K	L	V	V	S	E	E	G	R	Y	L	K	H	E	N	G	T	P	F	F	W	L	G	E	T	.	.	.	G	W	L	L	P	E	R	.	L	N	R	D	E	A	E	Y	Y	L	E	Q	C	K	R	R	G	Y	N	V	I	Q	V	Q	T	L	N	N	V	P	S	X	N	I	Y	G	Q	Y	S	X	T	D	G
Template Known Secondary structure			S					T	T	S	S	S				T	T	S		B								.	.	.		T	T					.															T	T	T								S		S	S	S	S		B		T	T			B	S		S	S	T
Template Predicted Secondary structure																												.	.	.								.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
																		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.												.	.	.	.	.
Template Conservation																																							.	.	.	.	.												.	.	.	.	.
Template Sequence		Y	N	F	K	N	I	N	Q	K	G	V	Y	G	Y	W	D	H	X	D	Y	I	I	R	T	A	A	K	K	G	L	Y	I	G	X	V	C	I	.	.	.	.	.	W	G	S	P	V	S	H	G	E	X	N	.	.	.	.	.	V	D	Q	A	K	A	Y	G	K	F	L	A	E	R	Y	K	D	E	P	N	I	I
Template Known Secondary structure		T			T	T				T	T																		T	T								S	.	.	.	.	.							T	T	S	S		.	.	.	.	.																T	T		S	S
Template Predicted Secondary structure																																							.	.	.	.	.												.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		443	.	.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.										.	.	.	.	.	.	490	.	.
Predicted Secondary structure									.	.	.																																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.																																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	W	S	L	G	N	E	.	.	.	S	G	Y	G	C	N	I	R	A	M	Y	H	A	A	K	A	L	D	D	T	R	L	V	H	Y	E	E	D	R	D	A	E	V	V	.	.	.	.	.	.	.	.	.	D	I	I	S	T	M	Y	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.																																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.							.	.	.																																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	W	F	I	G	G	D	I	R	G	D	V	K	T	A	E	W	E	A	L	A	T	S	I	K	A	I	D	K	N	H	L	X	T	F	H	P	R	G	R	T	T	S	A	T	W	F	N	N	A	P	W	L	D	F	N	X	F	Q	S	G	H	R	R	Y	G	Q	R	F	G	D	G	D	Y	P	I	E	E	N	T
Template Known Secondary structure		.					S	S			T	T	S	S																	S	S								B	T		B	T					T	T		T	T			B				B			S			T	T			S	S	S	S			S	S		T	T
Template Predicted Secondary structure		.
Template SS confidence
			182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
						493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	V	P	L	M	N	E	F	G	E	Y	P	H	P	K	P	R	I	I	C	E	Y	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		E	E	D	N	W	R	F	V	E	R	S	X	A	X	K	P	X	K	P	V	I	D	G	E	P	I
Template Known Secondary structure		T	T		T									T	S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions