Job Description P06864 Confidence 99.93% Date Thu Jan 5 10:59:27 GMT 2012 Rank 33 Aligned Residues 236 % Identity 17% Template c3jugA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-mannanase; PDBTitle: crystal structure of endo-beta-1,4-mannanase from the alkaliphilic2 bacillus sp. n16-5 Resolution 1.60 Å

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		316	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380											.	.	.	.
Predicted Secondary structure															.																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	R	D	I	K	V	R	D	G	L	F	W	.	I	N	N	R	Y	V	M	L	H	G	V	N	R	H	D	N	D	H	R	K	G	R	A	V	G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	A	H	Y	P	N	D	.	.	.	.	.	.	.	.	.	.	P	R	F	Y
Query Conservation															.																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.								.														.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																						.	.	.	.	.	.	.
Template Sequence		G	F	Y	.	.	.	V	D	G	N	T	L	Y	D	A	N	G	Q	P	F	V	M	K	G	I	N	H	.	.	.	.	.	.	.	G	H	A	W	Y	K	D	T	A	S	T	A	I	P	A	I	A	E	Q	G	A	N	T	I	R	I	V	L	S	D	G	G	Q	W	E	K	D	D	I	D	T	V	R	E	V	I
Template Known Secondary structure					.	.	.			T	T					T	T	S		B									.	.	.	.	.	.	.		G	G	G		G	G	G											T	T		S									S	S	S	S
Template Predicted Secondary structure					.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		35	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.								.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.
Query Sequence		E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	.	.	.	.	.	.	.	C	N	I	R
Query Conservation																																																																							.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	A	E	Q	N	K	M	V	A	V	V	E	V	H	.	.	.	.	.	.	.	.	.	.	.	D	A	T	G	R	D	S	R	S	D	L	D	R	A	V	D	Y	W	I	E	M	K	D	A	L	I	G	K	E	D	T	V	I	I	N	I	A	N	E	W	Y	G	S	W	D	G	A	A	W	A	D	G	Y	I
Template Known Secondary structure						T	T	T									.	.	.	.	.	.	.	.	.	.	.	T	T	T	T																	T					T	T		T	T	T							T	T				S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.																			.	480	.	.	.	.	.	.	.	.	.		490	.					.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.			.	.	.	.												.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.			.	.	.	.												.	.
Query Sequence		A	M	Y	H	A	A	K	A	L	D	D	T	R	L	V	H	Y	E	E	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	V	V	D	I	I	S	T	M	.	Y	T	.	.	.	.	R	V	P	L	M	N	E	F	G	E	Y	.	.	P	H	P	K	P	R	I	I	C	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.			.	.	.	.												.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.			.	.	.	.												.	.
Template Conservation
Template Sequence		D	V	I	P	K	L	R	D	A	G	L	T	H	T	L	M	V	D	A	A	G	W	G	Q	Y	P	Q	S	I	H	D	Y	G	Q	D	V	F	N	A	D	P	L	K	N	T	I	F	S	I	H	M	Y	E	Y	A	G	G	D	A	N	T	V	R	S	N	I	D	R	V	I	D	Q	D	L	A	L	V	I	G	E
Template Known Secondary structure										T	T			S							B	T	T	T	T	B	T													T		T	T										S	T	T	T	T	S	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	H	A	M	G	N	G	P	G	G	L	T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y	P	N	N	Y	N	F	C	L	D	G
Query Conservation
Alig confidence									.	.															.	.													.	.	.	.
Template Conservation									.	.															.	.													.	.	.	.
Template Sequence		F	G	H	R	H	T	D	.	.	V	D	E	D	T	I	L	S	Y	S	E	E	T	G	.	.	T	G	W	L	A	W	S	W	K	G	N	S	.	.	.	.	A	E	W	D	Y	L	D	L	S	E	D	W	A	G	N	H	L	T	D	W	G	N	R	I	V	H	G
Template Known Secondary structure									.	.														T	.	.						S		S	S				.	.	.	.	G	G	G	G	G	G		S	B	S	S	T	T	S	S	S	B										S
Template Predicted Secondary structure									.	.															.	.													.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions