Job Description P06864 Confidence 98.73% Date Thu Jan 5 10:59:27 GMT 2012 Rank 96 Aligned Residues 240 % Identity 14% Template c3emzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-xylanase; PDBTitle: crystal structure of xylanase xynb from paenibacillus2 barcinonensis complexed with a conduramine derivative Resolution 2.08 Å

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		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.														.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																															.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	R	H	D	N	D	H	R	K	G	R	A	V	G	M	D	R	V	E	K	D	L	Q	L	M	K	Q	H	.	N	I	N	S	V	R	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	P	N	D	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G
Query Conservation																															.									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	S	Y	A	N	S	F	K	I	G	A	A	V	H	T	R	M	L	Q	T	E	G	E	F	I	A	K	H	Y	N	S	V	T	A	E	N	Q	M	K	F	E	E	V	H	P	R	E	H	E	Y	T	F	E	A	A	D	E	I	V	D	F	A	V	A	R	G	I	G	V	R	G	H	T	L	V	W	H	N	Q
Template Known Secondary structure		T	G	G	G	T	T	T																								S					S	S	T	T	S						S	B	T	T	B															T	T	T								S	B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		405	.	.	.	.				410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450																		.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	N	V	G	.	.	.	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	G	C	N	I	R	A	M	Y	H	A	A	K
Query Conservation							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																														.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		T	P	A	W	M	F	E	D	A	S	G	G	T	A	S	R	E	M	M	L	S	R	L	K	Q	H	I	D	T	V	V	G	R	Y	K	D	Q	.	.	I	Y	A	W	D	V	V	N	E	A	I	E	D	K	T	D	L	I	M	R	D	T	K	W	L	R	L	L	G	E	D	Y	L	V	Q	A	F	N	M	A	H
Template Known Secondary structure				G	G	G	G	B		T	T	S	S	B																					T	T	T	T	.	.		S									B		S	S	T	T			B									T		T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.																				.	.	.	.	.	.	.	.							490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.														.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.														.	.
Query Sequence		A	L	D	D	T	R	L	V	H	Y	E	E	D	R	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	D	I	I	S	T	M	.	.	.	.	.	.	Y	T	R	V	P	L	M	N	E	F	G	E	Y	.	.	P	H	P	K	P	R	I	I	C	E	Y	A	H	A	M
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.														.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		E	A	D	P	N	A	L	L	F	Y	N	D	Y	N	E	T	D	P	V	K	R	E	K	I	Y	N	L	V	R	S	L	L	D	Q	G	A	P	V	H	G	I	G	M	Q	G	H	W	N	I	H	G	P	S	M	D	E	I	R	Q	A	I	E	R	Y	A	S	L	D	V	Q	L	H	V	T	E	L	D	L	S	V
Template Known Secondary structure					T	T	S							S	S		S	S																		T														T	T	B	S														T	T	S												S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		518	.	520	.	.	.																			.	.	.	.	.	.	530	.	.	.	.		.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		G	N	G	P	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	Y	Q	N	V	F	Y	K	H	.	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y	P	N	N	Y	N	F	C	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	H	E	D	Q	R	T	D	L	T	E	P	T	A	E	M	A	E	L	Q	Q	K	R	Y	E	D	I	F	G	L	F	R	E	Y	R	S	N	I	T	S	V	T	F	W	G	V	A	D	N	Y	T	W	L	D	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	R	G	R	K	N	W
Template Known Secondary structure		S		T	T							S	S																							T	T	T	T							S	S	S	S	T	T			G	G	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																.	.	.	.	.	.	310	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	L	I	Y	S	D	Q	T	P	G	P	G	L	K	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	V	F	D	T	E	L	Q	P	K	D	S	F	W	R	I
Template Known Secondary structure			S	S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions