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Job Description | P06864 | Confidence | 58.56% | Date | Thu Jan 5 10:59:27 GMT 2012 |
Rank | 199 | Aligned Residues | 144 |
% Identity | 10% | Template | c3blcB_ |
PDB info |
PDB header:chaperone,protein transport | Chain: B: PDB Molecule:inner membrane protein oxaa; |
PDBTitle: crystal structure of the periplasmic domain of the escherichia coli2 yidc
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Resolution | 2.50 Å |
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722 | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | R | L | S | C | T | V | R | G | Y | N | F | A | I | T | F | S | K | M | S | G | K | P | T | S | W | Q | V | . |
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N | G | E | S | L | . |
L | T | R | E | P | K | I | N | F | F | K | P | M | I | D | N | H | K | Q | E | Y | E | G | L | W | Q | P | N | H | L | Q | I | M | Q | E | H | L | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | G | K | L | I | S | V | K | T | D | V | L | D | L | T | I | N | T | R | G | G | D | V | E | Q | A | L | L | P | A | Y | P | K | E | L | N | S | T | Q | P | F | Q | L | L | E | T | S | P | Q | F | I | Y | Q | A | Q | S | G | L | T | G | R | D | G | P | D | N | P | A | N | G | P | R | P | L | Y | N | V | E | K | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
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793 | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | |
. | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | F | A | V | E | Q | S | D | G | E | V | L | I | I | S | R | T | V | I | A | P | P | V | F | D | F | G | M | R | C | T | Y | I | W | R | I | A | A | D | G | . |
Q | V | N | V | A | L | S | G | E | R | Y | G | D | Y | P | H | I | I | P | C | I | G | F | T | M | G | I | N | G | E | Y | D | Q | V | A | Y | Y | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | Y | V | L | A | E | G | Q | N | E | L | Q | V | P | X | T | Y | . |
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T | D | A | A | G | N | T | F | T | K | T | F | V | L | K | R | G | D | Y | A | V | N | V | N | Y | N | V | Q | N | A | G | E | K | P | L | E | I | S | S | F | G | Q | L | K | Q | S | I | T | L | P | P | H | L | T | F | R | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
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. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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