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Job DescriptionP06864
Confidence99.01%DateThu Jan 5 10:59:27 GMT 2012
Rank79Aligned Residues181
% Identity14%Templatec2y8kA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:carbohydrate binding family 6; PDBTitle: structure of ctgh5-cbm6, an arabinoxylan-specific xylanase.
Resolution1.47 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   330.........340.........350.........360.........370.........380 .........390.
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Query Sequence  NNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPND. . . . . . . . . . . . . . . . . . PRFYELCDIYG
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Template Sequence  NGQPLRGPYTSTEWTAAAP. . . . . . . . . YDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELG
Template Known Secondary structure  TS
B

SSS



.........GGGGGGT



TTTTSTT


TTTTT
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   56...60.........70.... .....80.........90.........100.........110.........120......
 
   392.......400.........410.........420.........430.........440......... 450......
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Query Sequence  LFVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNE. . . . . . . . . . . . . . . SGYGCNI
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Template Sequence  LYLV. . . . ITIGNGANNGNHN. . . . . . . . AQWARDFWKFYAPRYAKETHVL. YEIHNEPVAWGPPYSSSTANPPGAVDME
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TT
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SS
SSS
S
TTSTTSSSTT
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   127..130 .........140... ......150.........160..... ....170.........180.........190...
 
   457..460.........470.........480. ........ 490.........500... ...
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Query Sequence  RAMYHAAKALDDTRLVHYEEDRDAE. . . . . . . . . . . . . . . . . . . . . . . . . . . VVDIISTM. YTRVPLMNEFGEYP. . HPK
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Template Sequence  IDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALKDIRAFNKAVFGNENAVWTNEAVAFHGYAGWQETTIAVEELLKAGY
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TTS
S


SSTT


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TT
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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   507..510..... ....520.........530..
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Query Sequence  PRIICEYAH. AMGNGPGGLTEYQNVFY
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Template Sequence  PCFMTEYAGGGSGMGGLDVELTYELER
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S
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   274.....280.........290.........300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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