Job Description P06864 Confidence 96.51% Date Thu Jan 5 10:59:27 GMT 2012 Rank 132 Aligned Residues 141 % Identity 23% Template c2y2wC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:arabinofuranosidase; PDBTitle: elucidation of the substrate specificity and protein2 structure of abfb, a family 51 alpha-l-arabinofuranosidase3 from bifidobacterium longum. Resolution 2.50 Å

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.																													.	.	.	.	.	380						.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	Y	P	N	D	.	.	.	.	.	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation
Template Sequence		Q	D	V	L	D	L	V	K	E	L	G	V	T	C	V	R	Y	P	G	G	N	F	V	S	N	Y	N	W	E	D	G	I	G	P	R	E	N	R	P	M	R	R	D	L	A	W	H	C	T	E	T	N	E	M	G	I	D	D	F	Y	R	W	S	Q	K	A	G	T	E	I	M	L	A	V	N	M	G	T	R	G
Template Known Secondary structure												T							S		S	G	G	G	G	G			G	G	G	G	S	S		G	G	G							T	T	T	T						S	S	S												T										S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.											.	.	.	.	.	.	.	.				440	.	.	.	.	.	.	.	.	.	450	.													.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.									.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.									.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	.	.	.	.	.	.	.	.	.	.	I	H	A	Q	K	N	H	P	.	.	.	S	I	I	I	W	S	L	G	N	E	S	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	C	N	I	R	A	M
Query Conservation																													.	.	.	.	.	.	.	.	.	.									.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.									.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	A	L	D	E	L	E	Y	V	N	G	A	P	G	T	A	W	A	D	Q	R	V	A	N	G	I	E	E	P	M	D	I	K	M	W	C	I	G	N	E	M	D	G	P	W	Q	V	G	H	M	S	P	E	E	Y	A	G	A	V	D	K	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	S									T	T			S										S	S				S	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.																		480	.	.	.	.	.	.	.	.	.	490	.																				.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		Y	H	A	A	K	A	L	D	D	T	R	L	V	H	Y	E	E	D	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	V	V	D	I	I	S	T	M	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	L	M	N	E	F	G	E	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		A	H	A	M	K	L	A	E	S	G	L	E	L	V	A	C	G	S	S	G	A	Y	M	P	T	F	G	T	W	E	K	T	V	L	T	K	A	Y	E	N	L	D	F	V	S	C	H	A	Y	Y	F	D	R	G	H	K	T	R	A	A	A	S	M	Q	D	F	L	A	S	S	E	D	M	T	K	F	I	A	T	V
Template Known Secondary structure										T	T									S		T	T		T	T	T	T											G	G	G													T	T	T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
														502	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Y	P	H	P	K	P	R	I	I	C	E	Y	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	A	A	D	Q	A	R	E	A	N	N	G	T	K	D	I	A	L	S	F	D	E	W	G
Template Known Secondary structure													T		S	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions