Job Description P06864 Confidence 60.89% Date Thu Jan 5 10:59:27 GMT 2012 Rank 196 Aligned Residues 118 % Identity 14% Template c2ddxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-1,3-xylanase; PDBTitle: crystal structure of beta-1,3-xylanase from vibrio sp. ax-4 Resolution 0.86 Å

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		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.											.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.																				.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	.	.	.	.	.	.	.	.	.	.	C	N	I	R	A	M	Y	H	A	A	K	A	L	D	D	T	R	L	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																																.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	A	N	I	D	T	L	L	N	T	L	A	G	Y	D	R	P	V	Y	L	R	W	A	Y	E	V	D	G	P	W	N	G	H	S	P	S	G	I	V	T	S	F	Q	Y	V	H	D	R	I	I	A	L	G	H	Q	A	K	I	S	L	V	W	Q	V	A	S	Y	C	P	T	P	G	G	Q	L	D	Q	W	W
Template Known Secondary structure		T													T	T		S							T	S	S	T	T		G	G	G																						T		T	T	T											T	T	S		S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.						.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	D	R	D	A	E	V	V	D	I	I	S	T	M	Y	T	R	V	.	.	.	.	.	P	L	M	N	E	F	G	E	Y	P	H	P	K	P	R	I	I	C	E	Y	A	H	A	M	G	N	G	P	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.											.											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.											.
Template Sequence		P	G	S	E	Y	V	D	W	V	G	L	S	Y	F	A	P	Q	D	C	N	W	D	R	V	N	E	A	A	Q	F	A	R	S	K	.	G	K	P	L	F	L	N	E	S	T	.	P	Q	R	Y	Q	V	A	D	L	T	Y	S	A	D	P	A	K	G	T	N	R	Q	S	K	T	S	Q	Q	L	W	D	E	W	F
Template Known Secondary structure				G	G	G		S							S	S	G	G	G	G	T	T														.	T										.		T	T			T	T	T	T				S		T	T	T			S													T
Template Predicted Secondary structure																																				.											.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	Y	F	Q	F	M	S	D	N	S	D	I	V	K	G	F	T	Y
Template Known Secondary structure											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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