Job Description P06864 Confidence 98.55% Date Thu Jan 5 10:59:27 GMT 2012 Rank 104 Aligned Residues 222 % Identity 15% Template c2cncA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoxylanase; PDBTitle: family 10 xylanase Resolution 2.4 Å

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.														.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.				410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Query Sequence		Q	L	M	K	Q	H	N	I	N	S	V	R	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	P	N	D	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	.	.	.	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation
Template Sequence		L	I	A	K	E	F	N	S	I	T	P	E	N	C	M	K	W	G	V	L	R	D	A	Q	G	Q	W	N	W	K	D	A	D	A	F	V	A	F	G	T	K	H	N	L	H	M	V	G	H	T	L	V	W	H	S	Q	I	H	D	E	V	F	K	N	A	D	G	S	Y	I	S	K	A	A	L	Q	K	K	M	E
Template Known Secondary structure								S					S	S	T	T	S					B		T	T	S		B																T											S	S	S			G	G	G	T	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.																.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	N	I	R	A	M	Y	H	A	A	K	A	L	D	D	T	R	L	V	H	Y	E	E	D	R	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		E	H	I	T	T	L	A	G	R	Y	K	G	K	.	.	L	A	A	W	D	V	V	N	E	A	V	G	D	D	L	K	M	R	D	S	H	W	Y	K	I	M	G	D	D	F	I	Y	N	A	F	T	L	A	N	E	V	D	P	K	A	H	L	M	Y	N	D	Y	N	I	E	R	T	G	K	R	E	A	T	V	E
Template Known Secondary structure												B	T	T	.	.	B	S									B		T	T	S	S	B										T	T															T	T								S	S	T	T	S	T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
									479	480	.	.	.	.	.	.	.	.	.							490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure		.	.	.	.	.	.	.												.	.	.	.	.	.														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.												.	.	.	.	.	.														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	A	E	V	V	D	I	I	S	T	M	.	.	.	.	.	.	Y	T	R	V	P	L	M	N	E	F	G	E	Y	.	.	P	H	P	K	P	R	I	I	C	E	Y	A	H	A	M	G	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.												.	.	.	.	.	.														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.												.	.	.	.	.	.														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	E	R	L	Q	K	R	G	M	P	I	H	G	L	G	I	Q	G	H	L	G	I	D	T	P	P	I	A	E	I	E	K	S	I	I	A	F	A	K	L	G	L	R	V	H	F	T	S	L	D	V	D	V	L	P	S	V	W	E	L	P	V	A	E	V	S	T	R	F	E	Y	K	P	E	R	D	P	Y	T
Template Known Secondary structure								T	T	T														S	S		S														T	T	T													S			S	T	T			G	G	G	T	T	T	T	T	S			G	G	G	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
													521	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	P	G	G	L	T	E	Y	Q	N	V	F	Y	K	H	D	.	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y	P	N	N	Y	N	F	C	L	D	G	L	I	Y	S	D	Q	T	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	L	P	Q	E	M	Q	D	K	L	A	K	R	Y	E	D	L	F	K	L	F	I	K	H	S	D	K	I	D	R	V	T	F	W	G	V	S	D	D	A	S	W	L	N	D	F	S	I	P	G	R	T	N	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	F	D	R	K	L	Q	P
Template Known Secondary structure		T																								T	T	T	T							S		S	B	G	G	G		G	G	G	T	S	S	S	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S		B
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.																.	360	.	.	.	.	.	.	.
		589	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	G	L	K	E	Y	K	Q	V	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	A	Y	F	R	L	L	D	L	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions