Job Description P06864 Confidence 97.11% Date Thu Jan 5 10:59:27 GMT 2012 Rank 127 Aligned Residues 144 % Identity 21% Template c2c8nD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:alpha-l-arabinofuranosidase; PDBTitle: the structure of a family 51 arabinofuranosidase, araf51,2 from clostridium thermocellum in complex with 1,3-linked3 arabinoside of xylobiose. Resolution 2.9 Å

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.																													.	.	.	.	.	380						.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		E	K	D	L	Q	L	M	K	Q	H	N	I	N	S	V	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	Y	P	N	D	.	.	.	.	.	P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																					.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		K	D	V	I	E	L	V	K	E	L	N	V	P	I	I	R	Y	P	G	G	N	F	V	S	N	Y	F	W	E	D	G	V	G	P	V	E	D	R	P	R	R	L	D	L	A	W	K	S	I	E	P	N	Q	V	G	I	N	E	F	A	K	W	C	K	K	V	N	A	E	I	M	M	A	V	N	L	.	.	.	.
Template Known Secondary structure												T							S		S	G	G	G	G	G			G	G	G	G	S	S		T	T	T							T	T	T	T							S		T										T	T										.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430								.	.	.	.	.	.	.	.	.	440				.	.	.	.	.	.	.	.	.	450	.													.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	.	.	.	.	.	.	.	H	I	H	A	Q	K	N	H	P	S	.	.	.	I	I	I	W	S	L	G	N	E	S	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	C	N	I	R	A	M	Y	H	A
Query Conservation																												.	.	.	.	.	.	.											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	T	R	G	I	S	D	A	C	N	L	L	E	Y	C	N	H	P	G	G	S	K	Y	S	D	M	R	I	K	H	G	V	K	E	P	H	N	I	K	V	W	C	L	G	N	A	M	D	G	P	W	Q	V	G	H	K	T	M	D	E	Y	G	R	I	A	E	E	T	A	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	S																	S	S	S									T	T			S										S					S	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.																		480	.	.	.	.	.	.	.	.	.		490	.	.	.																											.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	A	L	D	D	T	R	L	V	H	Y	E	E	D	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	V	V	D	I	I	S	T	M	.	Y	T	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	M	N	E
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	M	I	D	P	S	I	E	L	V	A	C	G	S	S	S	K	D	M	P	T	F	P	Q	W	E	A	T	V	L	D	Y	A	Y	D	Y	V	D	Y	I	S	L	H	Q	Y	Y	G	N	K	E	N	D	T	A	D	F	L	A	K	S	D	D	L	D	D	F	I	R	S	V	I	A	T	C	D	Y	I	K	A
Template Known Secondary structure							T	T									S		T	T	S	T	T	T	T											G	G	G													T	T								T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	E	Y	P	H	P	K	P	R	I	I	C	E	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	R	S	K	K	D	I	Y	L	S	F	D	E	W	N
Template Known Secondary structure				T		S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions