Job Description P06864 Confidence 98.82% Date Thu Jan 5 10:59:27 GMT 2012 Rank 91 Aligned Residues 300 % Identity 15% Template c2bs9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-xylosidase; PDBTitle: native crystal structure of a gh39 beta-xylosidase xynb12 from geobacillus stearothermophilus Resolution 2.2 Å

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		355	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.																								.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400									.	.
Predicted Secondary structure												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		D	R	V	E	K	D	L	Q	L	M	.	K	Q	H	N	I	N	S	V	R	T	A	H	Y	P	N	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	.	.	.	.	.	.	.	.	E	S
Query Conservation												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	Y	L	D	H	L	K	L	V	Q	E	K	I	G	F	R	Y	I	R	G	H	G	L	L	S	D	D	V	G	I	Y	R	E	V	E	I	D	G	E	M	K	P	F	Y	N	F	T	Y	I	D	R	I	V	D	S	Y	L	A	L	N	I	R	P	F	I	E	F	G	F	M	P	K	A	L	A	S	G	D	Q
Template Known Secondary structure															S			S					S		T	T	S	T	T	T									T	T																					T	T										B		G	G	G	B	S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.													.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	.	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	C	N	I	R	A	M	Y	H	A	A	K	A	L	D	D	T
Query Conservation																																			.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	F	Y	W	K	G	N	V	T	P	P	K	D	Y	N	K	W	R	D	L	I	V	A	V	V	S	H	F	I	E	R	Y	G	I	E	E	V	R	T	W	L	F	E	V	W	N	E	P	N	L	V	N	F	W	K	D	A	N	K	Q	E	Y	F	K	L	Y	E	V	T	A	R	A	V	K	S	V	D	P	H
Template Known Secondary structure				T	T	T	T				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G																					T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.																	.	.	.	.	.	.	.		490	.																									.	.	.	.	.	.	.	.	500	.	.	.	.			.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		R	L	V	H	Y	E	E	D	R	D	A	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	I	S	T	M	.	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	L	M	N	E	F	G	E	Y	P	H	.	.	P	K
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		L	Q	V	G	G	P	A	I	C	G	G	S	D	E	W	I	T	D	F	L	H	F	C	A	E	R	R	V	P	V	D	F	V	S	R	H	A	Y	T	S	K	A	P	H	K	K	T	F	E	Y	Y	Y	Q	E	L	E	P	P	E	D	M	L	E	Q	F	K	T	V	R	A	L	I	R	Q	S	P	F	P	H	L
Template Known Secondary structure											S	S		T													T	T													B		S		S				S	S						B																				S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570		.	.	.	.	.	.	.	.		.	580	.	.	.	.
Predicted Secondary structure																																																																		.									.
Query SS confidence																																																																		.									.
Query Sequence		P	R	I	I	C	E	Y	A	H	A	M	G	N	G	P	G	G	L	T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y	.	P	N	N	Y	N	F	C	L	.	D	G	L	I	Y	S
Query Conservation																																																																		.									.
Alig confidence																.	.	.	.	.	.	.	.	.																								.	.																	.									.
Template Conservation																.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		P	L	H	I	T	E	Y	N	T	S	Y	S	P	I	.	.	.	.	.	.	.	.	.	N	P	V	H	D	T	A	L	N	A	A	Y	I	A	R	I	L	S	E	G	G	D	Y	.	.	V	D	S	F	S	Y	W	T	F	S	D	V	F	E	E	M	D	V	P	K	A	L	F	H	G	G	F	G	L	V	A	L
Template Known Secondary structure										S		S		T	T	.	.	.	.	.	.	.	.	.		G	G	G	G	S														G	G	G	T	.	.		S					S		S	B	S				T	T	S	S		S	S	S	S	S			S		S			T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.										.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	T	P	G	P	G	L	K	E	Y	K	Q	V	I	A	P	V	K	I	H	A	R	D	L	T	R	G	E	L	K	V	E	N	K	L	W	F	T	T	L	D	D	Y	T	L	H	A	E	V	R	A	E	G	E	T	L	A	T	Q	Q	I	K	L	R	D	V	A	P	N	S	E	A	P	L	Q	I	T	L	P
Query Conservation
Alig confidence														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	I	P	K	P	T	F	H	A	F	T	.	F	F	N	A	L	G	D	E	L	L	Y	R	D	G	E	M	I	V	T	R	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	S	I	A	A	V	L	W	N	L	V	M	E	K	G	E	G	L	T	K	E	V	Q	L	V	I	P
Template Known Secondary structure		T	T											.			T	T			S							T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S												S			S
Template Predicted Secondary structure														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	A	R	E	A	F	L	N	I	T	V	T	K	D	S	R	T	R
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		V	S	E	S	A	.	V	F	I	K	R	Q	I	V	N	E	Q	Y	G	N
Template Known Secondary structure				S	S		.									S	S	S	S	S
Template Predicted Secondary structure							.
Template SS confidence
		404	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions