Job Description P06864 Confidence 98.65% Date Thu Jan 5 10:59:27 GMT 2012 Rank 98 Aligned Residues 199 % Identity 15% Template c1xyzA_ PDB info PDB header:glycosyltransferase Chain: A: PDB Molecule:1,4-beta-d-xylan-xylanohydrolase; PDBTitle: a common protein fold and similar active site in two2 distinct families of beta-glycanases Resolution 1.40 Å

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		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		P	R	F	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N	H	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																						.																																						.	.														.	.	.	.	.	.	.
Template Conservation																						.																																						.	.
Template Sequence		D	Q	L	L	A	F	A	E	R	N	G	M	Q	M	R	G	H	T	L	I	.	W	H	N	Q	N	P	S	W	L	T	N	G	N	W	N	R	D	S	L	L	A	V	M	K	N	H	I	T	T	V	M	T	H	Y	K	G	K	.	.	I	V	E	W	D	V	A	N	E	C	M	D	D	S	G	N	G	L	R	S
Template Known Secondary structure											T	T										.		S	S	S							T	S																						T	T	T	T	.	.		S							S		B		T	T	S	S	S	B
Template Predicted Secondary structure																						.																																						.	.
Template SS confidence
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.			.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
											454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.																					.	.	.	.	.	.	490									.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	C	N	I	R	A	M	Y	H	A	A	K	A	L	D	D	T	R	L	V	H	Y	E	E	D	R	D	A	E	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	S	T	M	Y	.	.	.	.	.	.	.	.	T	R	V	P	L	M
Query Conservation		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	W	R	N	V	I	G	Q	D	Y	L	D	Y	A	F	R	Y	A	R	E	A	D	P	D	A	L	L	F	Y	N	D	Y	N	I	E	D	L	G	P	K	S	N	A	V	F	N	M	I	K	S	M	K	E	R	G	V	P	I	D	G	V	G	F	Q	C	H	F	I	N	G	M	S	P	E	Y	L	A	S	I
Template Known Secondary structure										T	T														T	T	S							S	S		S	S	S	S																T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.
		497	.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.											.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure										.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	F	G	E	Y	P	H	.	.	P	K	P	R	I	I	C	E	Y	A	H	A	M	G	N	G	P	G	G	.	.	.	.	.	.	.	.	.	.	L	T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G
Query Conservation										.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																				.	.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation																																																																																.	.
Template Sequence		D	Q	N	I	K	R	Y	A	E	I	G	V	I	V	S	F	T	E	I	D	I	R	I	P	Q	S	E	N	P	A	T	A	F	Q	V	Q	A	N	N	Y	K	E	L	M	K	I	C	L	A	N	P	N	C	N	T	F	V	M	W	G	F	T	D	K	Y	T	W	I	P	G	T	F	P	G	Y	G	N	P	.	.
Template Known Secondary structure											T	T														T	T	S																								T	T							S		S	B	T	T	S		S					S	T	T					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		737	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	Y	G	D	Y	P	N	N	Y	N	F	C	L	D	G	L	I	Y	S	D	Q	T	P	G	P	G	L	K	E	Y	K	Q	V	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	Y	D	S	N	Y	N	P	K	P	A	Y	N	A	I	K	E	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	815	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions