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Job DescriptionP06864
Confidence99.85%DateThu Jan 5 10:59:27 GMT 2012
Rank44Aligned Residues206
% Identity18%Templatec1wkyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of alkaline mannanase from bacillus sp. strain jamb-2 602: catalytic domain and its carbohydrate binding module
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   320........ .330.........340.........350.........360.........370.........380 ........
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Query Sequence  IKVRDGLFW. INNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPND. . . . . . . . . . PRFYELCD
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Template Sequence  FYVSGTTLYDANGNPFVMRGIN. . . . . . . HGHAWYKDQATTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAE
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TT
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GGG
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   36...40.........50....... ..60.........70.........80.........90.........100........
 
   389390.........400.........410.........420.........430.........440.........450... ......460.
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Query Sequence  IYGLFVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYG. . . . . . . CNIRAMYH
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Template Sequence  DNNLVAVLEVH. . . . . . . . . . . DATGYDSIASLNRAVDYWIEMRSALIGKEDTVIINIANEWFGSWDGAAWADGYKQAIP
Template Known Secondary structure  TT

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TGGGTTT
TTT

TT


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   109110......... 120.........130.........140.........150.........160.........170.......
 
   462.......470.........480.... ..... 490 .........500.. .......510......
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Query Sequence  AAKALDDTRLVHYEEDRDAEVVD. . . . . . . . . . . . . . . . . . IISTM. Y. . . . TRVPLMNEFGEY. . PHPKPRIICEYAHA
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Template Sequence  RLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTMFSIHMYEYAGGNASQVRTNIDRVLNQDLALVIGEFGHR
Template Known Secondary structure  TT

S

BTTTTBTT
TT

STTTSSSTTT


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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   517..520.........530.........540.....
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Query Sequence  MGNGPGGLTEYQNVFYKHDCIQGHYVWEW
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Template Sequence  HTNGDVDESTIMSYSEQRG. . VGWLAWSW
Template Known Secondary structure  TT

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   258.260.........270...... ...280....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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