Job Description P06864 Confidence 93.42% Date Thu Jan 5 10:59:27 GMT 2012 Rank 160 Aligned Residues 271 % Identity 14% Template c1nofA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:xylanase; PDBTitle: the first crystallographic structure of a xylanase from2 glycosyl hydrolase family 5: implications for catalysis Resolution 1.42 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.							.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.				.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																		.	.	.
Query SS confidence																			.	.	.	.	.	.																																		.	.	.
Query Sequence		H	N	I	N	S	V	R	T	A	H	Y	P	N	D	P	R	F	.	.	.	.	.	.	Y	E	L	C	D	I	Y	G	L	F	V	M	A	E	T	D	V	E	S	H	G	F	A	N	V	G	D	I	S	R	I	T	D	.	.	.	D	P	Q	W	E	K	V	Y	V	E	R	I	V	R	H	I	H	A	Q	K	N
Query Conservation																			.	.	.	.	.	.																																		.	.	.
Alig confidence																			.	.	.	.	.	.													.	.																				.	.	.
Template Conservation																																					.	.
Template Sequence		I	G	L	S	I	M	R	V	R	I	D	P	D	S	S	K	W	N	I	Q	L	P	S	A	R	Q	A	V	S	L	G	A	K	I	M	.	.	A	T	P	W	S	P	P	A	Y	M	K	S	N	N	S	L	I	N	G	G	R	L	L	P	A	N	Y	S	A	Y	T	S	H	L	L	D	F	S	K	Y	M	Q	T
Template Known Secondary structure													S	S	G	G	G	G	G	G	G										T	T					.	.				S				G	G	G	B	T	T	S	S	S	B	S			B	B		G	G	G
Template Predicted Secondary structure																																					.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		438			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.								.	.	.	460	.	.	.	.	.					.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.															.	.	.	.	.	.	.	.	490
Predicted Secondary structure			.	.																			.	.	.	.	.	.	.										.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																			.	.	.	.	.	.	.										.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	.	.	P	S	I	I	I	W	S	L	G	N	E	S	G	Y	G	C	N	I	.	.	.	.	.	.	.	R	A	M	Y	H	A	A	K	A	.	.	.	.	L	D	D	T	R	L	V	H	Y	E	E	D	R	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	D	I	I	S	T	M	Y
Query Conservation			.	.																			.	.	.	.	.	.	.										.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.		.																	.	.	.	.	.	.	.										.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		N	G	A	P	.	L	Y	A	I	S	I	Q	N	E	P	D	W	K	P	D	Y	E	S	C	E	W	S	G	D	E	F	K	S	Y	L	K	S	Q	G	S	K	F	G	S	L	K	V	I	V	A	E	S	L	G	F	N	P	A	L	T	D	P	V	L	K	D	S	D	A	S	K	Y	V	S	I	I	G	G	H	L
Template Known Secondary structure		T	T			.		S				S		S		T	T				S	S	B			B														G	G	G	G	T	T	S								T	T			G	G	G	T					T						T	T
Template Predicted Secondary structure						.
Template SS confidence
		153	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	V	P	L	M	N	E	F	G	E	Y	P	H	P	K	P	R	I	I	C	E	Y	A	H	A	M	G	N	G	P	G	G	L	T	E	Y	Q	N	V	F	Y	K	H	D	C	I	Q	G	H	Y	V	W	E	W	C	D	H	G	I	Q	A	Q	D	D	H	G	N	V	W	Y	K	F	G	G	D	Y	G	D	Y
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Sequence		Y	G	T	T	P	K	P	Y	P	L	A	Q	N	A	G	K	Q	L	W	M	T	E	H	Y	V	D	S	K	Q	S	A	N	N	W	T	S	.	.	.	.	.	.	.	.	.	.	.	.	A	I	E	V	G	T	E	L	N	A	S	M	V	S	N	Y	S	A	Y	V	W	W	Y	I	R	R	.	.	.	.	.	.
Template Known Secondary structure		T	T	S											T	T										S		T	T	S		T	T					.	.	.	.	.	.	.	.	.	.	.	.														T	T									S	B	S	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.													.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.																		.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	N	N	Y	N	F	C	L	D	G	L	I	Y	S	D	Q	T	P	G	P	G	L	K	E	Y	K	Q	V	I	A	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	H	A	R	D	L	T	R	G	E	L	K	V	E	N	K	L	W	F	T	T	L	D	D	Y	T	L	H	A	E
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	S	Y	G	L	L	T	E	D	G	K	V	S	K	R	G	Y	V	M	S	Q	Y	A	R	F	V	R	P	G	A	L	R	I	Q	A	T	E	N	P	Q	S	N	V	H	L	T	A	Y	K	N	T	D	G	K	M	V	I	V	A	V	N	T	N	D	S	D	Q	M	L	S	L	N	I	S
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	S	S	B		T	T	S		B												T	T	S		T	T								S		S	B	T	T									T	T	S										S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.							.	.	.	.	.	.	.	660	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		V	R	A	E	G	E	T	L	A	T	Q	Q	I	K	L	R	D	V	A	.	.	.	.	.	.	P	N	S	E	A	P	L	Q	I	T	L	P	Q
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	N	V	T	K	F	E	K	Y	S	T	S	A	S	L	N	V	E	Y	G	G	S	S	Q	V	D	S	S	G	K	A	T	V	W	L	N	P
Template Known Secondary structure		S												S	S	S		S	S										T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions