Job Description Q9XB42 Confidence 3.81% Date Thu Jan 5 12:38:30 GMT 2012 Rank 52 Aligned Residues 52 % Identity 25% Template d1hcfa_ SCOP info Cystine-knot cytokines Cystine-knot cytokines Neurotrophin Resolution 2.7

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		12	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.	.														.	.	.																													.
Query SS confidence												.	.														.	.	.																													.
Query Sequence		I	Y	R	Q	H	P	E	S	R	I	.	.	F	R	Y	C	T	G	K	Y	Q	W	H	G	S	.	.	.	V	C	H	Y	T	G	R	D	V	P	D	I	A	G	V	L	A	V	Y	A	E	R	R	Q	D	R	N	G	.	P	Y	T	C	L	M	S	I	T
Query Conservation												.	.														.	.	.																													.
Alig confidence												.	.														.	.	.																.	.	.	.	.	.	.	.						.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		V	S	E	T	A	P	A	S	R	R	G	E	L	A	V	C	D	A	V	S	G	W	V	T	D	R	R	T	A	V	D	L	R	G	R	E	V	E	V	L	G	E	V	.	.	.	.	.	.	.	.	P	A	A	G	G	S	P	L	R	Q	Y	F	F	E	T
Template Known Secondary structure			S	S	S			G	G	G	S					S	S															B	T	T	S							S			.	.	.	.	.	.	.	.			S	S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions