Job Description P63224 Confidence 71.79% Date Thu Jan 5 12:07:56 GMT 2012 Rank 134 Aligned Residues 78 % Identity 19% Template c3lk7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a Resolution 1.50 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	K	V	L	S	C	G	N	G	G	S	H	C	D	A	M	H	F	A	E	E	L	T	G	R	Y	R	E	N	R	P	G	Y	P	A	I	A	I	S	D	V	S	H	I	S	C	V	G	N	D	F	G	F	N	D	I	F	S	R	Y	V	E	A	V	G	R	E	G	D	V	L	L	G	I	S	T	S	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		E	N	K	K	V	L	V	L	G	L	A	R	S	G	E	A	A	A	R	L	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	I	V	T	V	N	D	.	.	G
Template Known Secondary structure		T	T									T	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								.	.	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																																														.	.	.	.	.	.	.	.	.			40
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	A	N	V	I	K	A	I	A	A	A	R	E	K	G	M	K	V	I	T	L	T	G	K	D	G	G	K	M	A	G	T	A	D	I	E	I	R	V	P	H	F	G	Y	A
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		K	P	F	D	E	N	P	T	A	Q	S	L	L	E	E	G	I	K	V	.	V	C	G	S	H	P	L	E	L	L	D	E	D	F	C	Y	X	I	K	N	P	G	I	P	Y	N
Template Known Secondary structure		S		G	G	G										T	T				.			S				G	G	G	G	G	S									T	T	S		T	T
Template Predicted Secondary structure																					.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions