Return to main results Retrieve Phyre Job Id

Job DescriptionP63224
Confidence45.51%DateThu Jan 5 12:07:56 GMT 2012
Rank198Aligned Residues109
% Identity17%Templatec3ecsD_
PDB info PDB header:translationChain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  DLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAIS
Query Conservation 
 
   
      
            
      
         
 
 
 
 
   
   
  
                 
Alig confidence 



















.....




































..................
Template Conservation     
  

            .....
   

  
   
  
  


   
 

   
  
  ..................
Template Sequence  SKCKKIXIERGELFLRRISL. . . . . SRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVA. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT
T.....TT

TT

S

..................
Template Predicted Secondary structure  .....






..................
Template SS confidence 















































































   87..90.........100...... ...110.........120.........130.........140...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 



























Query SS confidence 













































































Query Sequence  DVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR
Query Conservation                               
 

 

 

 
   
 
   

  
  

 

    
 

  

  
 
Alig confidence  ..........................



















































Template Conservation  ..........................  
 
 


 



  

   
  
   

 

 
 



   
  

 


Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . AKKRFSVYVTESQPDLSGKKXAKALCHLNVPVTVVLDAAVGYIXEKADLVIV
Template Known Secondary structure  ..........................TT




TTTTTTT


GGGGGG
S
Template Predicted Secondary structure  ..........................




















Template SS confidence 













































































   144.....150.........160.........170.........180.........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions