Job Description P63224 Confidence 96.54% Date Thu Jan 5 12:07:56 GMT 2012 Rank 56 Aligned Residues 150 % Identity 15% Template c2v45A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: a new catalytic mechanism of periplasmic nitrate reductase2 from desulfovibrio desulfuricans atcc 27774 from3 crystallographic and epr data and based on detailed4 analysis of the sixth ligand Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		H	A	I	Q	R	A	A	V	L	L	A	D	S	F	K	A	.	.	G	G	K	V	L	S	C	G	N	G	G	S	H	C	D	A	M	H	F	A	E	E	L	T	G	R	Y	R	E	N	R	P	G	Y	P	A	I	A	I	S	D	V	S	H	I	S	C	V	G	N	D	F	G	F	N	D	I	F	S	R	Y	V
Query Conservation																		.	.
Alig confidence																		.	.																																																													.	.
Template Conservation																																																																																.	.
Template Sequence		E	A	L	D	L	M	A	S	R	F	R	S	S	I	D	M	Y	G	P	N	S	V	A	W	Y	G	S	G	Q	C	L	T	E	E	S	Y	V	A	N	K	I	F	K	G	G	F	G	T	N	N	V	D	G	N	P	R	L	C	M	A	S	A	V	G	G	Y	V	T	S	F	G	K	D	E	P	M	G	T	.	.
Template Known Secondary structure																				G	G	G							T	T	S														T	T	T								G	G	G	G	T	T												S	S		S		S	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																	.	.																	.	.
Query SS confidence																	.	.																	.	.
Query Sequence		E	A	V	G	R	E	G	D	V	L	L	G	I	S	T	.	.	S	G	N	S	A	N	V	I	K	A	I	A	A	A	R	E	.	.	K	G	M	K	V	I	T	L	T	G	K	D	G	G	K	M	A	G	T	A	D	I	E	I	R	V	P	H	F	G	Y	A	D	R	I	Q	E	I	H	I	K	V	I	H	I
Query Conservation																	.	.																	.	.
Alig confidence																	.	.																	.	.									.																											.	.	.	.
Template Conservation																																													.																											.	.	.	.
Template Sequence		Y	A	D	I	D	Q	A	T	C	F	F	I	I	G	S	N	T	S	E	A	H	P	V	L	F	R	R	I	A	R	R	K	Q	V	E	P	G	V	K	I	I	V	A	.	D	P	R	R	T	N	T	S	R	I	A	D	M	H	V	A	F	R	P	G	T	D	L	A	F	M	.	.	.	.	H	S	M	A	W	V
Template Known Secondary structure		G	G	G	G	G	T		S						S							S															T	T							.		S	B			G	G	G	G	G		S							T	T							.	.	.	.
Template Predicted Secondary structure																																													.																											.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.
		182	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		236	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions