|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
Q | D | L | I | R | N | E | L | N | E | A | A | E | T | L | A | N | F | L | K | D | D | A | N | I | . |
. |
. |
. |
H | A | I | Q | R | A | A | V | L | L | A | D | S | F | K | A | G | G | K | V | L | S | C | G | N | G | G | S | H | C | D | A | M | H | F | A | E | E | L | T | G | R | Y | . |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | E | D | V | K | S | V | E | E | K | V | T | S | A | V | R | N | F | V | E | N | T | P | D | F | A | K | L | D | R | S | W | I | D | S | V | K | S | L | E | D | W | I | I | N | F | D | T | V | V | V | L | G | I | G | G | S | G | L | G | N | L | A | L | H | Y | S | L | R | P | L | N | W | N | E | M | T | R | E | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| G | G | G | G |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  | S |
| T | T | G | G | G | S |
| T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 140 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
R | E | N | R | P | G | Y | P | A | I | A | I | S | D | V | S | H | I | S | C | V | G | N | D | F | G | F | N | D | I | F | S | R | Y | V | E | A | V | G | R | E | G | D | V | L | L | G | I | S | T | S | G | N | S | A | N | V | I | K | A | I | A | A | A | R | E | . |
. |
. |
. |
. |
. |
. |
. |
K | G | M | K | V | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
|
|   |
|   |   |   |
|   |
|   |   |   |
|
|   | . | . | . | . | . | . | . | . |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
Template Sequence |   |
R | N | G | Y | A | R | V | F | V | V | D | N | V | D | P | D | L | M | S | S | V | L | D | R | I | D | P | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | T | L | F | N | V | I | S | K | S | G | S | T | A | E | V | M | A | T | Y | S | I | A | R | G | I | L | E | A | Y | G | L | D | P | R | E | H | M | L |
Template Known Secondary structure |   |
T | T | T |
|
|  |  |  |  |  |
| S |
|
|  |  |  |  |  |  |  |  | T | T |
|
| G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | G |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
|
|
. | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | T | G | K | D | G | G | K | M | A | G | T | A | D | . |
. |
. |
. |
I | E | I | R | V | P | H | F |
Query Conservation |   |
  |
|
|   |   |   |   |
|   |
|
|   |   |
|
| . | . | . | . |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
Template Sequence |   |
I | T | T | D | P | E | K | G | F | L | R | K | L | V | K | E | E | G | F | R | S | L | E | V | P | P | G |
Template Known Secondary structure |   |
 |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |