Job Description P63224 Confidence 22.58% Date Thu Jan 5 12:07:56 GMT 2012 Rank 366 Aligned Residues 68 % Identity 13% Template c2ha8A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tar (hiv-1) rna loop binding protein; PDBTitle: methyltransferase domain of human tar (hiv-1) rna binding2 protein 1 Resolution 1.60 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	A	N	V	I	K	A	I	A	A	A	R	E	K	G	M	K	V	I	T	L	T	G	K	D	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	A	G	T	A	D	I	E	I	R	V	P	H	F	G	Y	A	D	R	I	Q	E	I	H	I	K
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																												.
Template Sequence		K	P	P	Q	L	I	D	Y	L	Q	Q	K	K	T	E	G	Y	T	I	I	G	V	E	Q	T	A	K	S	L	D	L	T	Q	Y	C	F	P	E	K	S	L	L	L	L	G	N	E	R	E	G	I	P	A	N	L	I	Q	Q	L	D	V	C	V	E	I	P	Q	Q	G	I	I	R	S	L	.	N	V	H	V	S
Template Known Secondary structure			G	G	G											T	T										T	T				G	G	G					S	S							B	T	T	T	B	S						T	T		S									S	S	S	S			.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	H	I	L	I	Q	L	I	E	K	E	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	L	L	I	W	E	Y	T	R	Q	Q	L	L
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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