Job Description P63224 Confidence 99.71% Date Thu Jan 5 12:07:56 GMT 2012 Rank 25 Aligned Residues 161 % Identity 24% Template c2amlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution Resolution 1.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		I	R	N	E	L	N	E	A	A	E	T	L	A	N	F	L	K	D	D	A	N	I	H	A	I	Q	R	A	A	V	L	L	A	D	S	F	K	A	G	.	G	K	V	L	S	C	G	N	G	G	S	H	C	D	A	M	H	F	A	E	E	L	T	G	R	Y	R	E	N	R	P	G	Y	P	A	I	A	I	S	D
Query Conservation																																									.
Alig confidence																				.	.	.	.	.	.																.																										.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																																										.	.	.	.	.
Template Sequence		X	X	T	Y	I	N	E	E	E	E	X	C	R	V	I	L	A	D	.	.	.	.	.	.	F	Q	T	N	A	E	K	L	E	S	L	V	K	N	G	A	K	E	W	L	I	L	A	T	G	S	S	L	N	A	A	Q	S	A	K	Y	Y	I	E	N	L	.	.	.	.	.	A	D	V	R	I	T	I	E	E	P
Template Known Secondary structure							T	T												.	.	.	.	.	.													T	T			S																									.	.	.	.	.	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.																																										.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		V	S	H	I	S	C	V	G	N	D	F	G	F	N	D	I	F	S	R	Y	V	E	A	V	G	R	E	G	D	V	L	L	G	I	S	T	S	G	N	S	A	N	V	I	K	A	I	A	A	A	.	R	E	K	G	M	K	V	I	T	L	T	G	K	D	G	G	K	M	A	G	T	A	D	I	E	I	R	V	P
Query Conservation																																																				.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	N	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	E	K	L	S	S	H	L	D	L	V	I	G	I	S	Q	S	G	Q	S	T	S	T	I	S	A	L	E	R	V	K	K	E	A	S	V	P	V	V	A	L	T	S	D	V	T	S	E	I	A	E	F	A	D	I	T	L	D	I	G
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T									S	S	S		B																							S		T	T	S	G	G	G	G	G		S						S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.																.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		164	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		H	F	G	.	.	.	.	Y	A	D	R	I	Q	E	I	H	I	K	V	I	H	I	L	I	Q	L	I	E	K	E	M	V	K
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		S	G	K	E	R	V	G	Y	V	T	K	G	F	T	A	T	V	L	T	L	X	L	T	G	L	H	F	A	Y	K	T	V	Q
Template Known Secondary structure							S	S	S		S																					T	T	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions