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Job DescriptionP63224
Confidence94.42%DateThu Jan 5 12:07:56 GMT 2012
Rank83Aligned Residues148
% Identity13%Templatec1kqgA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:formate dehydrogenase, nitrate-inducible, major subunit; PDBTitle: formate dehydrogenase n from e. coli
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40...... ...50.........60.........70.........80.........90...
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Query Sequence  HAIQRAAVLLADSFKAGGK. . . . . . . . . . . . . . VLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGN
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Template Sequence  EAFSRIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMLTQKFARSLGMLA. . . . VDNQARVHGPTVASL
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TTS
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S
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   128.130.........140.........150.........160.........170.........180........ .190.........200...
 
   94.....100.........110.........120.. .......130........ .140.........150.........160.........170
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Query Sequence  DFGFNDIFSRYVEAVGREGDVLLGISTSG. . NSANVIKAIAAAREKG. MKVITLTGKDGGKMAGTADIEIRVPHFGYADR
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Template Sequence  APTFGRGAMTNHWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVV. DPRFTRTASVADIYAPIRSGTDITF
Template Known Secondary structure  S

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TGGGGG
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   205....210.........220.........230.........240.........250........ .260.........270.........280...
 
   171........180....
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Query Sequence  IQEIHIKVIHILIQ
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Template Sequence  L. . . . SGVLRYLIE
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   284 .....290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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