Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGH5
Confidence1.83%DateThu Jan 5 11:29:11 GMT 2012
Rank43Aligned Residues16
% Identity25%Templatec3rj1Q_
PDB info PDB header:transcriptionChain: Q: PDB Molecule:mediator of rna polymerase ii transcription subunit 8; PDBTitle: architecture of the mediator head module
Resolution4.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   281........290......
Predicted Secondary structure 





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Query Sequence  NLLGDGVRRAIIAGVE
Query Conservation 


   
   


   
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Template Conservation   

  




  



Template Sequence  SLVTTLLRKKNIPEVD
Template Known Secondary structure  GGTT



GGG
Template Predicted Secondary structure 




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   108.110.........120...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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