Job Description P0AGH5 Confidence 99.89% Date Thu Jan 5 11:29:11 GMT 2012 Rank 8 Aligned Residues 213 % Identity 14% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	W	S	R	Y	G	E	V	S	F	F	L	G	T	D	D	L	G	R	D	V	L	S	R	L	L	S	G	A	A	P	T	V	G	G	A	F	V	V	T	L	A	A	T	I	C	G	L	V	L	G	T	F	A	G	A	T	H	G	L	R	S	A	V	L	N	H	I	L	D	T	L	L	A	I	P	S	L	L
Query Conservation
Alig confidence																							.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		T	V	T	T	G	W	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	.	.	.	.	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I
Template Known Secondary structure				B		T	T	T	T	T	S	G	G	G	T		T	T	T	S	T	T	.	.	.	.																															T		S	S	S	T	T								T	T					S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		146	.	.	.	150	.	.	.	.	.	.	.																										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	I	I	V	V	A	F	A	G	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	H	A	M	F	A	V	W	L	A	L	L	P	R	M	V	R	S	I	Y	S	M	V	H	D	E	L	E	K	E	Y	V	I	A	A	R	L	D	G	A	S	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																																																																		.
Template Sequence		S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	.	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P
Template Known Secondary structure										T		S	S	S	S									T	S	S					T	T	T	S																												G	G	G	S	.		T									T				S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240										.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.															.	.
Query Sequence		L	N	I	L	W	F	A	V	M	P	N	I	T	A	G	L	V	T	E	I	T	R	A	L	S	M	A	I	L	D	I	A	A	L	G	F	L	D	L	G	.	.	.	.	.	.	.	.	.	A	Q	L	P	S	P	E	W	G	A	M	L	G	D	.	.	A	L	E	L	I	Y	V	A	P	W	T	V	M	L	P
Query Conservation																																										.	.	.	.	.	.	.	.	.															.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I
Template Known Secondary structure								T	T	G	G	G	T																	T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	I	M	I	S	V	L	L	V	N	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions