Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACB2
Confidence24.70%DateThu Jan 5 11:17:47 GMT 2012
Rank256Aligned Residues182
% Identity16%Templated2flia1
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90...... ...100.........110.........120.........
Predicted Secondary structure 
























.











Query SS confidence 













































.
































Query Sequence  PGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWRED. GLVARMSRICKQTVPEMIVMSDTCFCEYTSHGH
Query Conservation 


 
 
 
 
   
      

  
 



   

  

 
    .
 
  


 

  

 
 
  




 





Alig confidence 



























........









.




























....
Template Conservation 
 
   
     
 
      
   

 ........   

        
   
  

            
     ....
Template Sequence  PSILAADYANFASELARIEETDAEYVHI. . . . . . . . DIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPER. . . .
Template Known Secondary structure  BGGGS
GGGTT

........BSSSSS
B


TT

SSSSGGG....
Template Predicted Secondary structure 





........

















....
Template SS confidence 















































































   8.10.........20.........30..... ....40.........50.........60.........70.....
 
   130.........140.........150.........160.........170.........180...... ...190.........200........
Predicted Secondary structure 






















.



Query SS confidence 
























































.





















Query Sequence  CGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKD. TAIMSYSTKFASSFYGPFREAA
Query Conservation 


     
 

 

  

  


 
 















 


  

  
   .
 









 








Alig confidence  ....................




































.





















Template Conservation  .................... 
      


 
 
                  
      
   
              
Template Sequence  . . . . . . . . . . . . . . . . . . . . YVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQV
Template Known Secondary structure  ....................GT
SGGG
S
TTS
TTS
GGGGGGGTTT
S
Template Predicted Secondary structure  ....................


















Template SS confidence 















































































   76...80.........90.........100.........110.........120.........130.....
 
   209210.........220.........230.... ..... 240.........250. ........260
Predicted Secondary structure 














........................





....
Query SS confidence 

























. . . . . . . . . . . . . . . . . . . .




. . . .











. . . .








Query Sequence  GSALKGDRKSYQMNPMNRREAIRESL. . . . . . . . . . . . . . . . . . . . LDEAQ. . . . GADCLMVKPAGA. . . . YLDIVRELR
Query Conservation   
 
 








 

  




  .................... 

 
....


  





 ....





  
Alig confidence 

























....................




....











....








Template Conservation                       
               
   


           


 






    
       

Template Sequence  LIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR
Template Known Secondary structure  SS
TT
SS



GGGTT


SS

TTTT

STSS
Template Predicted Secondary structure 




























Template SS confidence 















































































   136...140.........150.........160.........170.........180.........190.........200.........210.....
 
   261...
Predicted Secondary structure 


Query SS confidence 



Query Sequence  ERTE
Query Conservation      
Alig confidence 



Template Conservation   

 
Template Sequence  TALN
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 



   216...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions