|   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | H | L | A | R | E | I | E | R | I | A | N | A | G | I | R | S | V | M | T | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | S | H | H | . |
T | D | E | T | G | S | D | A | W | R | E | D | G | L | V | A | R | M | S | R | I | C | K | Q | T | V | . |
P | E | M | I | V | M | S | D | T | C | F | C | E |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   | . |
|
|   |   |
|
|   |
|   |   |   |   |
|   |
|   |   |
|
|
|   |
|
|   |   |
| . |
|   |
|   |
|   |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|
Template Sequence |   |
I | D | N | F | A | R | C | A | Q | L | A | R | E | A | G | Y | D | G | V | E | V | M | G | S | E | G | Y | L | I | N | E | F | L | T | L | R | T | N | Q | R | S | D | Q | W | G | G | D | Y | R | N | R | M | R | F | A | V | E | V | V | R | A | V | R | E | R | V | G | N | D | F | I | I | I | Y | R | L | S | M | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| B | T | S |  |  |  |  |  |  |
| T | T | T |
|
|
|
| S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | T | S | H | G | H | C | G | V | L | C | E | H | G | V | D | N | D | A | T | L | E | N | L | G | K | Q | A | V | V | A | A | A | A | G | A | D | F | I | A | P | S | A | A | M | D | G | Q | V | Q | A | I | R | Q | A | L | D | A | A | G | F | K | D | T | A | I | M | S | Y | S | T | K | F | A | S | S | F | Y | G | P |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | V | E | D | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | F | A | E | T | V | E | L | A | Q | A | I | E | A | A | G | A | T | I | I | N | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | G | W | H | E | A | R | I | P | T | I | A | T | P | V | P | R | G | A | F | S | W |
Template Known Secondary structure |   |
| S | T | T |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
| B | T | T |
| S | S |
| S | S | S | T | T | S |
| T | T | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 |
  |
  |   |
204 | . | . | . | . | . | 210 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
. | . | . | . | . | . | |
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | E | A | A | G | S | A | L | K | . |
. |
. |
. |
. |
. |
G | D | R | K | S | Y | Q | M | N | P | M | N | R | R | E | A | I | R | E | S | L | L | D | E | A | Q | G | . |
A | D | C | L | M | V | . |
K | P | A | G | A | Y | L | D | I | V | R | E | L | R | E |
Query Conservation |   |
|
|
|
|
|   |
|   |
|   | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|
|   |   |   |
|
|   |
|
| . |
|
|   |   |
|
| . |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |   |
|
|
|
|   |   |
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |   |   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
Template Sequence |   |
V | T | R | K | L | K | G | H | V | S | L | P | L | V | T | T | N | R | I | N | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Q | V | A | D | D | I | L | S | R | G | D | A | D | M | V | S | M | A | R | P | F | L | A | D | A | E | L | L | S | K | A | Q | S |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S |
| S | S |
|  |  |  |
| S | S |
|
| S | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  | S | T |  |  |  |  |
| T | T |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . |
  |