 |
Job Description | P0ACB2 | Confidence | 95.87% | Date | Thu Jan 5 11:17:47 GMT 2012 |
Rank | 26 | Aligned Residues | 105 |
% Identity | 18% | Template | d1bxna1 |
SCOP info | TIM beta/alpha-barrel
| RuBisCo, C-terminal domain
| RuBisCo, large subunit, C-terminal domain
|
Resolution | 2.70 |
|
 |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
. | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
Query Sequence |   |
T | L | E | N | L | G | K | Q | A | V | V | A | A | A | A | G | A | D | F | I | A | P | S | A | A | M | D | G | Q | V | Q | A | I | R | Q | A | L | D | A | A | G | F | K | D | T | A | I | M | S | Y | S | T | K | F | A | S | S | F | Y | G | P | F | R | E | A | A | G | S | A | L | K | . |
. |
G | D | R | K | S | Y | Q |
Query Conservation |   |
|
|   |   |
|
|   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|   | . | . |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |
|   |
|
|   |
|   |
|
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
| . | . | . | . | . |   |   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |
Template Sequence |   |
S | G | R | N | Y | G | R | V | V | Y | E | G | L | K | G | G | L | D | F | M | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | E | N | I | N | S | Q | P | F | M | H | W | R | D | R | F | L | F | . |
. |
. |
. |
. |
V | M | D | A | V | N | K | A | S | A | A | T | G | E | V | K | G | S | Y |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
| S | S |
| T | T | S |
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
  |
  |   |
221 | . | . | . | |
. | . | |
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
|
|
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . |
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | P | M | . |
N | R | . |
R | E | A | I | R | E | S | L | L | D | E | A | Q | G | A | D | C | L | M | V | K | P | A | G | A | Y | L | D | I | V | R | E | L | R | . |
. |
. |
E | R | T | E | L | P | I | G | A |
Query Conservation |   |
|
|   |
| . |
|   | . |   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
| . | . | . |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   | . |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
L | N | V | T | A | G | T | M | E | E | M | Y | R | R | A | E | F | A | K | S | L | G | S | V | I | I | M | V | D | L | . |
I | V | G | W | T | C | I | Q | S | M | S | N | W | C | R | Q | N | D | M | I | L | H | L |
Template Known Secondary structure |   |
 |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | G | . | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  | . |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | |
. | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|