Job Description P0ACB2 Confidence 71.75% Date Thu Jan 5 11:17:47 GMT 2012 Rank 100 Aligned Residues 105 % Identity 11% Template c3dz1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution Resolution 1.87 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		L	C	E	H	G	V	D	N	D	A	T	L	E	N	L	G	K	Q	A	V	V	A	A	A	A	G	A	D	F	I	A	P	S	A	A	M	.	.	.	.	.	.	.	.	D	G	Q	V	Q	A	I	R	Q	A	L	D	A	A	G	F	K	D	T	A	I	M	S	Y	S	T	K	F	A	S	S	F	Y	G	P	F
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																							.	.	.													.	.	.	.	.	.	.	.																.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																																				.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	H	D	D	G	K	I	D	D	V	S	I	D	R	L	T	D	F	Y	A	E	.	.	.	V	G	C	E	G	V	T	V	L	G	I	L	G	E	A	P	K	L	D	A	A	E	A	E	A	V	A	T	R	F	I	K	R	A	K	.	.	S	X	Q	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B		T	T	S		B															.	.	.	T	T		S					S	T	G	G	G	T	G	G	G	S																	T	.	.	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.																																				.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.											.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	A	A	G	S	A	L	K	G	D	R	K	S	Y	Q	M	N	P	M	N	R	R	E	A	I	R	E	S	L	L	D	E	A	Q	G	A	D	C	L	M	V	K	P	A	G	A	.	.	.	.	.	.	.	.	.	.	Y	L	D	I	V	R	E	L	R	E	R	T	E	L	P	I	G	A	Y	Q	V
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	V	S	A	P	G	F	A	A	X	R	R	L	A	R	L	S	X	D	A	G	A	A	G	V	X	I	A	P	P	P	S	L	R	T	D	E	Q	I	T	T	Y	F	R	Q	A	T	E	A	I	G	.	.	D	D	V	P	W	V	L	Q	D	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S															T		S								T	T			S																	.	.	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Template SS confidence
																79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions