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Job Description | P0ACB2 | Confidence | 52.54% | Date | Thu Jan 5 11:17:47 GMT 2012 |
Rank | 151 | Aligned Residues | 102 |
% Identity | 17% | Template | c3cvyA_ |
PDB info |
PDB header:lyase/dna | Chain: A: PDB Molecule:re11660p; |
PDBTitle: drosophila melanogaster (6-4) photolyase bound to repaired2 ds dna
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Resolution | 2.70 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
I | Q | R | P | R | R | L | R | K | S | P | A | L | R | A | M | F | . |
E | E | T | T | L | S | L | N | D | L | V | L | P | I | F | V | E | E | E | I | D | D | Y | K | A | V | E | A | M | P | G | V | M | R | I | P | E | K | H | L | A | R | E | I | E | R | I | A | N | A | G | I | R | S | V | M | T | F | G | I | S | H |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | R | K | G | L | R | L | H | D | N | P | A | L | S | H | I | F | T | A | A | N | A | A | P | G | R | Y | F | V | R | P | I | F | I | L | D | P | . |
G | I | L | D | W | M | Q | V | G | A | N | R | W | R | F | L | Q | Q | T | L | E | D | L | D | N | Q | L | R | K | L | N | S | R | L | F | V | V | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
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84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | T | D | E | T | G | S | D | A | W | R | E | D | G | L | V | A | R | M | S | R | I | C | K | Q | T | V | P | E | M | I | V | M | S | D | T | C | F | C | E | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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R | G | K | P | A | E | V | F | P | R | I | F | K | S | W | R | V | E | M | L | T | F | E | T | D | I | E | P | Y |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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