Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACB2
Confidence84.80%DateThu Jan 5 11:17:47 GMT 2012
Rank74Aligned Residues171
% Identity19%Templatec3bolB_
PDB info PDB header:transferaseChain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.........170. .....
Predicted Secondary structure 




























.
Query SS confidence 









































































.




Query Sequence  LVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQ. VQAIR
Query Conservation   
  


 

  

 
 
  




 








     
 

 

  

  


 
 














.
 


Alig confidence 






















..






....





































.




Template Conservation 
   

 


 
     





..
 
    ....       

       

  
   


 
  

     
  

 
Template Sequence  IVRNAVRIARRAAGEKLVFGDIG. . PTGELPY. . . . PLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILELKAAV
Template Known Secondary structure  TTS
..

S

BT....TTSSB
T
S


Template Predicted Secondary structure 





..






....













Template SS confidence 















































































   85....90.........100....... ..110.... .....120.........130.........140.........150........
 
   177..180.........190.........200.........210.........220.........230.........240.........250 ...
Predicted Secondary structure 





























...
Query SS confidence 









































































. . .


Query Sequence  QALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAG. . . AYL
Query Conservation    

  
   
 









 








 
 
 








 

  




   

 



  





... 

Alig confidence 

















....................





















...










...


Template Conservation   
        

  
 
 ....................   
 
  
         
   ...    




  

    
Template Sequence  LAAREVSRDVFLIAHMTF. . . . . . . . . . . . . . . . . . . . DEKGRSLTGTDPANFAITFDEL. . . DIDALGINCSLGPEEIL
Template Known Secondary structure 
SSS


....................
TTS

TTS

TS...S
SSSS
Template Predicted Secondary structure 



....................









...





Template SS confidence 















































































   159160.........170...... ...180.........190........ .200.........210.....
 
   254.....260.........270.........280.........290.........300.........
Predicted Secondary structure 
















Query SS confidence 























































Query Sequence  DIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLI
Query Conservation 



  
     

 














  
  
   
  


 
 





 
Alig confidence 




















............






















Template Conservation    
  
      

 





............ 
  

  
         

 

Template Sequence  PIFQELSQYTDKFLVVEPNAG. . . . . . . . . . . . YPLKPHDFAVHIDSYYELGVNIF
Template Known Secondary structure  TT

S



............



TTTTT
S
Template Predicted Secondary structure 






............







Template SS confidence 























































   216...220.........230...... ...240.........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions