Job Description P0ACB2 Confidence 26.77% Date Thu Jan 5 11:17:47 GMT 2012 Rank 247 Aligned Residues 154 % Identity 14% Template c1zuwA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase 1; PDBTitle: crystal structure of b.subtilis glutamate racemase (race) with d-glu Resolution 1.75 Å

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		103	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160		.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.
Predicted Secondary structure												.	.																																										.	.								.									.
Query SS confidence												.	.																																										.	.								.									.
Query Sequence		S	R	I	C	K	Q	T	V	P	E	.	.	M	I	V	M	S	D	T	C	F	C	E	Y	T	S	H	G	H	C	G	V	L	C	E	H	G	V	D	N	D	A	T	L	E	N	L	G	K	Q	A	V	V	.	.	A	A	A	A	G	A	D	.	F	I	A	P	S	A	A	M	.	D	G	Q	V	Q	A	I	R
Query Conservation												.	.																																										.	.								.									.
Alig confidence												.	.													.	.	.	.	.	.	.	.	.	.	.	.																		.	.								.									.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	E	I	M	R	Q	L	P	K	E	N	I	I	Y	V	G	D	T	K	R	C	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	P	R	P	E	E	E	V	L	Q	Y	T	W	E	L	T	N	Y	L	L	E	N	H	H	I	K	M	L	V	I	A	C	N	T	A	T	A	I	A	L	D	D	I	Q
Template Known Secondary structure									S	T	T									G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	S	S	S																				S			S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.													.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		Q	A	L	D	A	A	G	F	K	D	T	A	I	M	S	Y	S	T	K	F	A	S	S	F	Y	G	P	F	R	E	A	A	G	S	A	L	K	G	D	R	K	S	Y	Q	M	N	P	M	N	R	R	E	A	I	R	E	S	L	L	D	E	A	Q	G	A	D	C	.	L	M	V	K	P	A	G	A	Y	L	D	I
Query Conservation																																																																					.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	P	V	V	G	V	I	Q	P	G	A	R	A	A	I	K	V	T	D	N	Q	H	I	G	V	I	G	T	E	N	T	I	K	S	N	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S					S													S	S	S													T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.																																									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		V	R	E	L	R	E	R	T	E	L	P	I	G	A	Y	Q	V	S	G	E	Y	A	M	I	K	F	A	A	L	A	G	A	I	D	E	E	.	.	.	K	V	V	L	E	S	L	G	S	I	K	R	A	G	A	D	L	I	F
Query Conservation																																						.	.	.
Alig confidence																						.	.															.	.	.
Template Conservation																						.	.
Template Sequence		Y	E	E	A	L	L	A	L	N	P	D	L	K	V	E	N	L	A	C	P	.	.	L	L	V	P	F	V	E	S	G	K	F	L	D	Q	T	A	D	E	I	V	K	T	S	L	Y	P	L	K	D	T	S	I	D	S	L	I
Template Known Secondary structure											T	T									T	.	.	T						T	S																						S			S
Template Predicted Secondary structure																						.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions