Job Description P0ACB2 Confidence 84.19% Date Thu Jan 5 11:17:47 GMT 2012 Rank 78 Aligned Residues 124 % Identity 23% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	P	G	V	M	R	I	P	E	K	H	L	A	R	E	I	E	R	I	A	N	A	G	I	R	S	V	M	T	F	G	I	S	H	H	T	D	E	T	G	S	D	A	W	R	E	D	G	L	V	A	R	M	S	R	I	C	K	Q	T	V	P	E	M	I	V	M	S	D	T	C	F	C	E	Y	T	S	H	G
Query Conservation
Alig confidence																																.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E	F	G	I	S	E	L	S	L	.	.	.	.	.	.	G	D	T	I	G	A	A	N	P	A	Q	.	.	.	V	E	T	V	L	E	A	L	L	A	R	F	P	A	N	.	.	.	.	.	.	.	.	.	Q	I	A	L	H	F
Template Known Secondary structure			B	T	T	T	B																		T		S					.	.	.	.	.	.			S	S								.	.	.										T	T	S		G	G	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.										.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		H	C	G	V	L	C	E	H	G	V	D	N	D	A	T	L	E	N	L	G	K	Q	A	V	V	A	A	A	A	G	A	D	F	I	A	P	S	A	A	M	D	G	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	Q	A	I	R	Q	A	L	D	A	A	G	F	K	.	.	.	D	T	A	I	M	S	Y	S
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	D	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	T	A	L	A	N	X	V	T	A	L	Q	X	G	I	T	V	F	D	G	S	A	G	G	L	G	G	C	P	Y	A	P	G	S	S	G	N	A	A	T	E	D	I	V	Y	X	L	E	Q	X	D	I	K	T	N	V	K	L	E	K	L	L	S	A
Template Known Secondary structure		B	G	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S													T							B	G	G	G					T	T							B		B											T	T		B
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210													.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	F	A	S	S	F	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	W	I	E	E	K	X	G
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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