 |
Job Description | P77731 | Confidence | 17.19% | Date | Thu Jan 5 12:32:12 GMT 2012 |
Rank | 51 | Aligned Residues | 79 |
% Identity | 10% | Template | d1oi6a_ |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| dTDP-sugar isomerase
|
Resolution | 1.4 |
|
 |
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | I | N | R | A | Q | P | A | N | L | P | L | T | I | H | E | L | E | R | H | P | L | . |
. |
. |
G | T | Q | A | F | I | P | M | K | G | E | V | F | V | V | V | V | A | L | G | D | D | K | P | D | L | S | T | L | R | A | F | I | T | N | G | E | . |
. |
Q | G | V | N | Y | H | R | N | V | W | H | H | P | L | F |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|   | . | . | . |   |
|
|   |
|
|
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |
|
|   |   |   |   |
|
|
|   |   |   |
|   | . | . |
|
|
|   |
|   |   |
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |
|   |
|   |
|   |   |
| . | . | . | . |
|
|
|
|
|
|   |
|   |   |
|   |   |
|   |
|
|
|   |
|
|   |
|   |
|   |
|
|   |
|
|
|
|   |   |
|
|
|
|
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |
|
|   |
|   |
|
|
|
| . |   |
Template Sequence |   |
T | I | H | S | M | S | K | R | G | . |
. |
. |
. |
V | V | R | G | I | H | Y | T | V | T | P | P | G | T | A | K | Y | V | Y | C | A | R | G | K | A | M | D | I | V | I | D | I | R | V | G | S | P | T | F | G | Q | W | D | S | V | L | M | D | Q | Q | D | P | R | A | V | Y | L | P | V | G | V | G | H | A | F | . |
V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T | . | . | . | . | B |  |  |  |  |  |  |  |
| T | T | T |
|
|
|  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
|
|
| B | T |
| T | T | T | T |
|  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |
| T | T |
|  |  |  |  | . |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | |
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
. |
  |
  |   |
129 | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | W | Q | R | V | T | D | F | L |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|   |
Template Sequence |   |
A | L | E | D | D | T | V | M | S |
Template Known Secondary structure |   |
 |
| S | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|