Job Description P77731 Confidence 5.99% Date Thu Jan 5 12:32:12 GMT 2012 Rank 97 Aligned Residues 73 % Identity 14% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	T	L	I	S	I	N	R	A	Q	P	A	N	L	P	L	T	I	H	E	L	E	R	H	P	L	G	T	Q	A	F	I	P	M	K	G	E	V	F	V	V	V	V	A	L	G	D	D	K	P	D	L	S	T	L	R	A	F	I	T	N	G	E	Q	G	V	N	Y	H	R	N	V	W	H	H	P	L	F	A
Query Conservation
Alig confidence															.	.	.	.											.																.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation															.	.	.	.											.																.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		H	E	L	X	A	V	K	I	W	F	D	K	G	.	.	.	.	A	E	G	Y	V	H	A	H	R	H	.	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	.	.	.	.	.	.	.	.	.	.	.	D	G	V	I	K	V	L	T	A	G	D	S	F	F	V	P	P	H	V	D	H	G	A	V	.	C
Template Known Secondary structure		T	T										T	T	.	.	.	.									S	S	.																.	.	.	.	.	.	.	.	.	.	.	T	T							T	T							T	T							.
Template Predicted Secondary structure															.	.	.	.											.																.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.
		130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	R	V	T	D	F	L	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	G	G	I	L	I	D	T	F
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions