Job Description P45394 Confidence 1.92% Date Thu Jan 5 12:02:31 GMT 2012 Rank 66 Aligned Residues 83 % Identity 17% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.								.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		E	N	D	I	A	V	G	N	I	I	G	A	N	I	F	N	I	V	I	V	L	G	L	P	A	L	I	T	P	G	E	I	D	P	L	A	Y	S	R	D	Y	S	V	M	L	L	V	S	I	I	F	A	L	L	C	W	R	R	S	P	Q	P	.	.	.	.	.	.	.	G	R	G	V	G	V	L	L	T	G	G
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence																												.																																				.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		N	V	T	L	V	V	S	T	L	I	A	H	I	A	F	N	I	L	V	E	T	N	L	P	K	T	.	P	Y	M	T	Y	T	G	A	I	I	F	M	I	Y	L	F	Y	F	V	A	V	I	E	V	T	V	Q	H	Y	L	K	V	E	S	Q	P	A	R	A	A	S	I	T	R	A	S	R	I	A	F	P	V	V
Template Known Secondary structure																							T	S				.	S	S																															T	T
Template Predicted Secondary structure																												.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		309	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	V	W	L	A	M	L	Y	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	L	A	N	I	I	L	A	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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