Job Description P45394 Confidence 3.72% Date Thu Jan 5 12:02:31 GMT 2012 Rank 22 Aligned Residues 153 % Identity 9% Template c2w8aC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	S	L	A	A	S	L	H	E	Q	R	D	L	A	V	G	T	A	L	G	S	N	I	I	N	I	L	L	I	L	G	L	A	A	L	V	R	P	F	T	V	H	S	D	V	L	R	R	E	L	P	L	M	L	L	V	S	V	V	A	G	S	V	L	Y	D	G	Q	L	S	R	S	D	G	I	F	L	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	G	X	F	L	A	R	I	S	R	G	R	S	I	R	E	F	I	L	G	V	L	L	V	P	A	G	V	S	T	V	W	F	S	I	F	G	G	T	A	I	V	F	E	Q	N	G	E	S	I	W	G	D	G	A	A	E	E	Q	L	F	G	L	L	H	A	L	P	G	G	Q	I	X	G	I	I	A	X	I
Template Known Secondary structure											T	T	T																																				T						T	T		S										T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	L	W	L	L	F	I	V	K	L	A	R	Q	A	E	R	Q	G	T	D	S	L	T	R	E	Q	L	A	E	L	P	R	D	G	G	L	P	V	A	F	L	W	L	G	I	A	L	I	I	M	P	V	A	T	R	M	V	V	D	N	A	T	V	L	A	N	Y	F	A	I	S	E	L	T	M
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		L	L	G	T	F	F	I	T	S	A	D	S	A	S	T	V	X	G	T	X	S	Q	H	.	.	.	.	G	Q	L	E	A	N	K	W	V	T	A	A	W	G	V	A	T	A	A	I	G	L	T	L	L	L	S	G	G	D	N	A	L	S	N	L	Q	N	V	T	I	V	A	A	T	P	F	L	F	V
Template Known Secondary structure																						T	T	T	.	.	.	.	T		S	S																									G	G	G
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.					.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions